| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNL04620 |
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| Symbol | |
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| ID | 3255010 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006681 |
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| Strand | - |
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| Start bp | 289185 |
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| End bp | 292357 |
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| Gene Length | 3173 bp |
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| Protein Length | 999 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638253933 |
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| Product | exoribonuclease II, putative |
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| Protein accession | XP_568006 |
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| Protein GI | 58261192 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GACCCAGCAG ATATTTCGGC GCGGGCACAA GAAGCAACAC TGGAGCGGTT GGCACTGCAA
AATTATCAAG GCTTCGAGGC TTCTGTACTA AAATATTTGG TTCTACACTC TTACTGCGAA
ACAAGATGGC CCTCTTGCCG GCAAGATCAG CGATCTCGTC AAGCTTTGCT CGTAGAGCCT
TTGCATCCAC CTCTCGCTCA TGCGATGCTC GCCGCACCAG AGTAGGCTCT TCGACTAAGC
AACCGCAACT GAAGGCCAGA GAGATACTGG ACACTCTTGC TGCCGACGCC ACGCTCTTGT
CCACATCAAG AGCACCGACC AGCTTGAAGT CCGAAAAACC AGCCCGAGTC AAGTTTGAGG
TTGCAGAAGG CCAGAGCAAT GACCGAAGGG CATATTTTGT CAATGATGTA GATGCTGAGG
TAGGGTTGGA TTGGGGGTCT ATTGAAGGAG ACGGGAGTAG TGCTGGATTA GAGATTGGAC
GCGTAGTAGA ATGCCGAAGG TAAGTAATGG TGTCCAGCAT AGATATACTT GTACTGATTG
TTCGCAGATC CGGTCAGGTC TCCTTGGGCT TAATCCTGGC CTCCATCCTT ATAGGCGAAC
GCCCTCGTTT TCTCCTCCTT CGATCGTCTG GTGAAATCTG GCCAGTGTCA GCCCACGACG
TGCAGTTCAT TATGCCCATA TCTCTCATGC CTCCATCACT TACAGAGGCT TGTTGGTCAC
CTGAACTACT TCAAGCTTGG GCCCAATCGG AAAGCAGCTC CGGTTTGGCA AGTGAGACAA
CGTCCACCAC TCCAGAGATG ATGGAGGCAA GGAGAAAGGT TGCATTGATG CTCAGGAGGG
TGCAAAGGGA AACTGAGAGG ATGTGCGGCA AACTTCGAGG AGGGACGTTT GACAAAGGTC
TCATTGGCGG CGCGGAAGGT GTATGGGAGA AATGGGCGTC GGAAAACGAC AGCGAGCGGA
CGACCATCAC CGCTGTAGAG GCCGCGGAGT ACATCCTCAA CCCTTCAAGC GGAACAGAAT
CCCAGTCTCC ACCTATTCAA ATAAAGCCAA ATACCTTACC TGCATACGCT GCCCACGTTC
TTCTTATGGG ACGTCCTGAT ATGTTTGTCA GCGACGAAGG AGATATGTGG GCTACTGGGA
CATTTATAGT TCGCAGCAAG GCCGAGAGAC AACGAATTGA GCGGGTTCAG CGATGGGTTG
AGGCACACAA GTCGAATGGA GACGACGCTG AACCATTGCG TTCATTCGTG GACAGAGCTA
AAGCTGTCAT TGCTTTATCT GAAAAAATCT ACACAGAGAC CGAAGGTGAC CCTCTTAAAC
CATATACGAA CGGTCTTCCC AGCTGGTCCT CAACGGACCT TGACATGATC TACACCCTCT
TCGGTGCTGT CGCCGAAACT CGTTCCACCC AAACGTCGCC CTTCTTGTCT CTCGCCATCG
CCATTGCAAG GTTGATCACT CCCGATCCGG AAGAAGTCGT CGACCGAGGA ACAATTACCA
TTTTGTTACA GAAGATGGGT ATGATCCTTC CCTGGGACAG CTTGGAGACC TCTAGAGTGG
CGGAATCGAA CATGAAGGCT CTAGCCAAGG CTTCTACCAG CGGCGATATC AAGGGTGAAG
GCGAATTCCT CCAGGGCAAT GAATTGGATC ATCTAAGAAT AGATTACTCT GACCAAAAAG
TCTATGTGAT TGATGATGCC ACTGCATCTG AATTGGATGA TGGCATTGCT CTGGAGCGAA
TATTAAACTC GGAAGACGTT TGGGTCCATG TACACGTGGC TGACCCCACG AGGTATATCC
CTCCTGCCCA TCCTTTGGCA AAGCGAGCTT CTGTCATGGG ATCTTCCCTA TATTTGCCCG
AAGGAAACTC CCCCTTGTTC CCATCAGACG TGATCATGAG GGAACTATCT CTGGGAGCCA
GTGTGCAGAG AGATGAAGGG AGACAAGGTG TAATAACCTT TTCGGCCAGA GTAGGCAAGG
ATGGCGAAGT TCATGACACG AAGGTCAATT TGGGATGGAT CAAGAAGCCT CGGGTAGTCA
CCTATTCCTC GGTCGACCGA GCTCTCGGAC TTACTCCTGT GAAATCATAT CGTCCATTTG
GCGGTCCACA AAGTTTTGAT GAGCCTGTCA AATCTGAGGT AATCTCTTCA GATATTGAAG
ATTTGCAGAA GCTTTATGAA CTAGCCAAGA ATATCCGTGC CAAGCGCTAT GCCACTGCTG
GATTTGATTG GACTTGGCCG TCTTCTTCAG TCCGGATCCT CAATCAACAA GCCCCACCTA
ACCCTGATGT TTTTGCCCTT CCCAACATAC CCTCATGTCC CCAACTTTTC TCTGGCTCTT
TATCAGTTGA TTACTGCGTC TCGTCTTCTC CCGCAACCCT CACATCCGCG ACGATGGTCG
CCGAATTCAT GATTTTGGCT GGTAGATTGG CGGCGTCCTT CTGCTCAGAG CGCAACATCC
CCATGATATA CAGAGGCAGT ACTGCCCCAA AACCTGTCGC CACGAACTCG ACTCTAGATC
AATGGCTTTC TCTTCGTATA CCTGGTATGG GTATCATCGA CCCTTATGTG ATGGCGGAAC
CTGGGTGGTA CCGTTCGTCA GCATTTGTCA GTCTCAAACC CTCCGCACAC TGGATTATGG
GCTTTGATGC CCCTGGCGGA GGTTATGTGC GTGCAACCTC ACCCCTGAGA AGATTTGATG
ATATGCTTGT GCATTGGCAA ATCAAGGCTG CGCTTGCGAA AGACCGCGGT GAGACAGGGA
AATTGGCCAA AAGCCTTAAG AAGGAGGAAA TTGTGACCTT GGCGCAGAGA AGCGACGAAG
GATCAAAGCG GGCTAAGAGG GCAGGAGTCA ACGCGGAACT ATTTTGGAAA ACACAGGTGA
TTAATAAACA TTTCCAGTCG CCTAATGGAT GGCCAGTCCC AGGGAGATCC GTCAAGGAGG
AAGAGGGGCT CGTTGACGTC AGGGGTGAGA TGATCGCAAG AATTGCTGGC GTGTCTGAAA
GTTCAGTTTT TGGAGAATGG ACAACAGTAG CGGTTGAGAG TTTAGGTATC CATGTTGCGA
AAATGGAGCA TCCTGCTGGG AAATTTTGGA AGATGGGGGA AGAAGTCCGA GTTAGGCTGA
AGCGGTCGGA GGGGTGGCCC AATCCTCGTA TTACTTTGAC GTTAGCAGAA TAG
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| Protein sequence | MALLPARSAI SSSFARRAFA STSRSCDARR TRVGSSTKQP QLKAREILDT LAADATLLST
SRAPTSLKSE KPARVKFEVA EGQSNDRRAY FVNDVDAEVG LDWGSIEGDG SSAGLEIGRV
VECRRSGQVS LGLILASILI GERPRFLLLR SSGEIWPVSA HDVQFIMPIS LMPPSLTEAC
WSPELLQAWA QSESSSGLAS ETTSTTPEMM EARRKVALML RRVQRETERM CGKLRGGTFD
KGLIGGAEGV WEKWASENDS ERTTITAVEA AEYILNPSSG TESQSPPIQI KPNTLPAYAA
HVLLMGRPDM FVSDEGDMWA TGTFIVRSKA ERQRIERVQR WVEAHKSNGD DAEPLRSFVD
RAKAVIALSE KIYTETEGDP LKPYTNGLPS WSSTDLDMIY TLFGAVAETR STQTSPFLSL
AIAIARLITP DPEEVVDRGT ITILLQKMGM ILPWDSLETS RVAESNMKAL AKASTSGDIK
GEGEFLQGNE LDHLRIDYSD QKVYVIDDAT ASELDDGIAL ERILNSEDVW VHVHVADPTR
YIPPAHPLAK RASVMGSSLY LPEGNSPLFP SDVIMRELSL GASVQRDEGR QGVITFSARV
GKDGEVHDTK VNLGWIKKPR VVTYSSVDRA LGLTPVKSYR PFGGPQSFDE PVKSEVISSD
IEDLQKLYEL AKNIRAKRYA TAGFDWTWPS SSVRILNQQA PPNPDVFALP NIPSCPQLFS
GSLSVDYCVS SSPATLTSAT MVAEFMILAG RLAASFCSER NIPMIYRGST APKPVATNST
LDQWLSLRIP GMGIIDPYVM AEPGWYRSSA FVSLKPSAHW IMGFDAPGGG YVRATSPLRR
FDDMLVHWQI KAALAKDRGE TGKLAKSLKK EEIVTLAQRS DEGSKRAKRA GVNAELFWKT
QVINKHFQSP NGWPVPGRSV KEEEGLVDVR GEMIARIAGV SESSVFGEWT TVAVESLGIH
VAKMEHPAGK FWKMGEEVRV RLKRSEGWPN PRITLTLAE
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