| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNL04100 |
|---|
| Symbol | |
|---|
| ID | 3254756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006681 |
|---|
| Strand | + |
|---|
| Start bp | 119522 |
|---|
| End bp | 121099 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638253882 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_567964 |
|---|
| Protein GI | 58261108 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATATA AAGGAAGAGC TTTGATTGAG AATGGCGACA TTCGCTTCGA CATAAAGCTC
GCGTCGCCCG GCATGGAGCT GAGTTGGTTC TCATCCCAAC TCCTCATGAC GTAAGTACTT
TTCGTACTTA GCACAAGTAT AGTAGTATAC ATCTGACGCT CGTACGTATA ACTATTCGTA
TGGTCAGCTT CAAGGCCAAA CCACTCCTAA ACTCAACATG GTAAGATTCG CTTTTGCCCC
ATCCATTGTG CAATAGCTCG CTTACTATTG CGCTCACTCT AGTCCTTGGC GTATCTTGAA
CAAGATACAA CGCAAGGTAT CTTTTCTTGT CCTCGTTTAT ACTCTCTGCA GGCAACTAAC
TCCTCATTAG CTCTCGCTGA TTCCATATGG AACGTCAGCT GGAACACGGC CAACCAGCTC
GTTACAGCGT CTGCTGATGG CCATATCCGA GTGTGGGATG TTGAAGAGTT GAGACAACCG
GTCCACGATA TTGATTCACA TCCTCTTGCG ATTACGTCTT TGTCAGTGGC CGATAAAAAG
GCTTTAGCTT CCAGTCTGGA TGGCACTATA GTACTGGTAG ATACCGTGAA TGGGGAACAA
CTAGGCAAAG TTAATTCAGG ACGGGTGAAA GTATCGGCGG AAGGACCAGG TGAGCCACGT
TCTGGTTGCA GTGAGCACGC GTTTTTTGAG CTCATACATG CCGATAGAAA TCCCTGCTTT
TGCCTGTTCT CTGCATCCTC AAAGTGCTTG CTGGGCGTGG TCAGGGCGCT CCTCTAAAGT
TGTCATCCGA ACGATGGTCT CCGACGACGC CGACCCCACC ACACAAGGAC CACTTGGCGG
GGAAAGTAGC ATTATGGACG GTGGAAAAGG GAAATTTGGT ATGGACTTGC AATTTGTAAG
GTTCCAGGGC CTTATGTACC CCTGACATAC AGTGGATAAC CTTCCTGTAG TCCCCTGATG
GTCGCTCACT TGCCCTTGCT ACCGATCAAG GTCAGGTTGT GGTTTTCGAC ACCGAAACGC
GAGCTACTAT TGCAACCTAC ACTTCACATA ACAAGGCCGT CAGAACCATT GGCTGGTCTC
CTGATTCCCA AGTAGGTGGA TATGATAAAT ATACAATTCA TACAAGAATA AAAGTGACGC
TTGGATCTTC TAGTGGCTAT ACTCTGGTTC TGACGACCAT CTGATTGTCC TCTATGACGC
CCGAGCTGGC TCCCAATCCG GAGCTGGTGG CAAGGGTGAA GGGGCAGTGG CTATGATGCA
AGGTCATCAA AGCTGGGTAC TCAGCGTTGC GCCATCACCT GATGGTAGAC TCTTGGGTAG
CGGGTGAGTA AAAAAAAGCC GGTCAGTAAA ACAAAAGTGT TATACACTGA TGCGATCGTC
CCTAGTGGCG CGGATCATCT TATCAAACTT TGGGATATTG GACAGCGAAC CTGTGTTTCG
ACGTCATCGA GCAATGCGGA CGTCTGGGGA TTTGCGTGGC AGCCTGAAGG AGCCGGCACC
CTTCCCCCTG GGAAGCAATT TGCAGTGGCT GGAGATGATA AGGTCGTTAC GCTTTATAGA
GCTGCAGGAG CTGTATAG
|
|---|
| Protein sequence | MGYKGRALIE NGDIRFDIKL ASPGMELSWF SSQLLMTWNT ANQLVTASAD GHIRVWDVEE
LRQPVHDIDS HPLAITSLSV ADKKALASSL DGTIVLVDTV NGEQLGKVNS GRVKVSAEGP
EIPAFACSLH PQSACWAWSG RSSKVVIRTM VSDDADPTTQ GPLGGESSIM DGGKGKFGMD
LQFSPDGRSL ALATDQGQVV VFDTETRATI ATYTSHNKAV RTIGWSPDSQ WLYSGSDDHL
IVLYDARAGS QSGAGGKGEG AVAMMQGHQS WVLSVAPSPD GRLLGSGGAD HLIKLWDIGQ
RTCVSTSSSN ADVWGFAWQP EGAGTLPPGK QFAVAGDDKV VTLYRAAGAV
|
|---|
| |