Gene CNK03230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK03230 
Symbol 
ID3254693 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand
Start bp962598 
End bp963884 
Gene Length1287 bp 
Protein Length205 aa 
Translation table 
GC content51% 
IMG OID638253813 
Product40s ribosomal protein s5-1, putative 
Protein accessionXP_567915 
Protein GI58261010 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01028] ribosomal protein S7(archaeal)/S5(eukaryotic) 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTTTCTCCC CAACCACTTT CCGATACCGA AACTTCCTCC TACACCAAGG ACGGAACAGG 
ACAAGAACCG ACTTTTTAAC GGAAGGATTC TTCAAAAAAC CAACAAAAAA GATTGATCAA
GATGGCCGCT ATCCAGGCTC TTCCTACTGA GGTGCAGAAG ATTGCGAACG AGGGAACTGT
CAAGCTTTTT GGCAAGTGGG AGTCTGAGGG GTGAGTGGTA TTTCCATCTC ATGGAGAATA
ACAGGATTGG CCAAAGGGGA AGCAGAGCTT GAGATCTTTG AGCGAGAGGC TGAGAAGCGA
GGAGAATGAG CAAGCTGCAC GGTTGAGGAA TGGGAAGGTC GGGAATACGC AGAATGACGA
CTAACGCTGT ACTGCAGTGT CGAGGTTAAG GACATCTCTC TCCAGGACTA CATCAACGTT
AACCACGCTG TCTACGTCCG TGAGTAACAC ATCTCGTATT TGTGTCAAAT GTCCAATCTG
ACAAATAACT GGCAGCCCAC ACTGCTGGCC GATACGCCAA GAAGCAGTTC GCCAAGGGCC
GTATGCCCAT TGTCGAGCGA CTCGTCAACG CGTGAGTTGG TTTTGCAAGA GTGGGGATCG
AAAGGAATGT GGCTGATTGG GATCTGGTAT TAGTCTCATG ATGAACGGCC GAAACAACGG
TAAGAAGATC ATGGCCGTCC GAATCGTCCA ACACGCTTTC GAGATCATCC ACCTCGTCAC
CGAGCAGAAC CCCATCCAGG TCCTCGGTAA GTTCTCGGTG TGTGAAGTAG CTTGAGGCCA
GTGGCTAATC GTCATTACAG TTGACGCTAT CATCAACACC GGTCCCCGAG AAGACTCTAC
CCGAATTGGT TCTCAGGGTA CCGTCCGTCG ACAGGCTGTC GACGTCTCTC CTTTGAGGCG
AGTCAACCAG GCTATCTCTC TCTTGACCAT TGGTGTAAGT TATCATACCC TGTGCTTACT
CAATCCGCCG CCGCCACTGA CAGTTTCTTC CAGACCCGAG AGTCCGCCTT CCACAACTCC
AAGTCCGTCT CCGAGTGTCT CGCCGACGAG CTTGTCAACG CCGCCAAGGG CTCTTCCAAC
TCTTACGCCA TTAAGAAGAA GGACGAGCTT GAGCGTGTCG CCAAGTCTAA CCGATAATTT
TCGCCAGTAT ACCAATTTTT ATATGGTTTT GTGGAGATTG TTGGCGCTTG GTCGTTGGAT
GAGGTTGGGG AGTATTGTAG GAGGGCCTGT GGATGGAATA GGCTTTATTC TGGCTTTTGG
CTCGCTGGCA TCTGCATCAA TTCAGAA
 
Protein sequence
MAAIQALPTE VQKIANEGTV KLFGKWESEG VEVKDISLQD YINVNHAVYV PHTAGRYAKK 
QFAKGRMPIV ERLVNALMMN GRNNGKKIMA VRIVQHAFEI IHLVTEQNPI QVLVDAIINT
GPREDSTRIG SQGTVRRQAV DVSPLRRVNQ AISLLTIGTR ESAFHNSKSV SECLADELVN
AAKGSSNSYA IKKKDELERV AKSNR