Gene CNK02830 details

Gene Information

• Locus tag: CNK02830
• ID: 3254676
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006680
• Strand: +
• Start bp: 834701
• End bp: 837075
• Gene Length: 2375 bp
• Protein Length: 358 aa
• GC content: 46%
• IMG OID: 638253774
• Product: multidrug transporter, putative
• Protein accession: XP_567878
• Protein GI: 58260936
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2814] Arabinose efflux permease

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.102961
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATCCCAATAT AGTAGCAACG TTATTCGCAA TATCTTCCCC CCCAACTGCC CTCGGAGCTC 
GGGGCAGCTC TATATCAAAT ACAACTTGCC AATATGAGTT TGTAAGTCAG TTGTGCGGGA 
TATTGACGAC ATAGCCTGCG GCTCTCTTGT TTCGTGCAGA AGAGCTGACT TGCCTCATTT 
CTTTACAGAT GCATAGAATA CAATGGTACC TCTTGCTTCT ATAGAAAGTG ACCGTGAACC 
TTTGATAATA AGTCTTTGGT GCCTCGTGGA ACGTGAAACC ACTTACGATC AATGTCTAAT 
AGCTTTCTCA TTTGAGAAGT CCCATCATGT CGGAAAGAAC ACCACTTGTC CCTAAAATCA 
GCCAGAAATC GTCTGGCTTC CTATCTAATT TAGACTATGT CCTTATTCTC CCTGGTTAGT 
TGTTTGATTC AATATTATTA GTCTTTGTCA AATGCAAATT GACCGTTTTC TGATCACTGA 
TGAGTAGCTC TCCTATCCAA CAACTTTTTC GCAGCCTTCG AAAGTACTAT CGCAGCTTCG 
ACGCAAGGAG CTGTAGGAAC AGAATTCAAC TCTTCTGATC ATGTTGCATG GGTGGCTATA 
TCTTACCTAA CTGTATCGAC CGCAGTTCAG CCTGTAAGTG CCCCTATCTG CCCACGAATT 
ACAAGCTAAT CTACCGCCTT CCATTAAGCT TTACGGGCGT GCCTCTGATC TCTTTGGGAG 
GACTAGATTA TATGTCTTGT CTCTAGCAGT GTTCGCCCTA GGCTGTCTTG GGTGCGGATT 
AAGTAATAAC TTGGGTCAGA TGATAGCTGC CAGGGCTATC TGTGGTATAG GAGGTAAATA 
TACCTGCTTG ACTAGCAAGT CATCGACTAA TTACCTTTTT TAGGCGGAGG CTTGATTACC 
GTCTCTCAAG TTTGTGCTTG GGATGTTCTT CCCATGCGTT TGCGGCCTCT GTACCAAGCT 
GCCAACAATG TCACGTACGG TGTACGCTAA ATATCTGTGC CTTTTTGCTT TTTCCTCATG 
TGGCTGACTG TTCCACAGCT TGGTGCTGCT TTAGGAGCTT CTTTAGGAGG TATCTTATCA 
GATTCCATTG GTTGGCGTTT TGCCTACTTC TTTCCGGTAC CTTTAACTAT CTTCTCTATA 
GTGGTGTTTC TTTGCAGAGC GAGCCCAAAG CTACTTGAGA TTCAAGCAGG CAAAACCAAT 
AGTTTTCAGA AAAAAGATAT TGATTCATTG GGCAGTGTGC TTTTGGTAAG TCGAATCTCA 
CATGGAATAT AGTCTAAAAT TTGCTGATCC AGAGAGTTAT AATCAGATGA CTTCCATCAC 
ACTTTTCATG CTTGTTATCA ATCTTGGAGG CAGCACCATA CCCTGGTCCA GTTCGGCTAA 
TCCCATTCTT CTCGTCTTTT CAGTCATTAC CACGTTAGCC TTTTTTCAGC ATGAGAAGAG 
AGTTAAACTG CCTGTCTTAC CAATCAATCT CTTGACTAAC CGACGAATGG TACCTCAAGT 
GGGATTAAAC TTGTTCGGGG CAATGACCAT CTTTGGCGTA AGTCTAATAT CGACAAATCA 
ACATCAACTG ATCTCACACA TTGTAGACAC TTTATCTCAT ACCTGTCTTT TTTCAAACGA 
CACTCCTGAC CTCCGCCAGT GTCGCATCTC GCCGTCTTCT GTATCCCACA CTTACCGCCC 
CAATCGCTTC TATTGTGACC GGGATATTCC TTCATTGTCA TCGTCGGGCA ACGGCTAGGA 
GCTATTAGTC TCGCCGCGGG GGCACTCATG ATGTTTGCGT TGACTTTCTC AAACAATGAG 
TCAAAGGGCG AGTGGTACTT TATTGCGAGA CTAATCTGGG TTCATGCGGG AATGGGAGTG 
ATGTTTATAT CGAGTCTAAT CGACATTCTT AGCACGTCAG GCACTGGTGA GCTTGAGAGA 
TCCGTCAATA TCTCATAACC TTCTGGCAGT TTTATCTAAT CACTTTACAG ACCATGCGGC 
TGCCACGTCG CTTATTTTCC TCCTACGGTC CATAGGTACC GTGCTGGGCA TATCCGTATC 
TCAAGCTATC CTCCAAAATA TACTCTCGTA TCAGCTTGTC ACTCACTTCA CCAGCCCTGG 
CTCCGAGACA ATCATCCGCG GCATTCGGGA GTCGGTTGAT TATCTTGCCC AGCTAGATCC 
GTCTCGAAGA CAAGTAGCAG TTAATTGCTA TGTGTTGGCG TTCCGCGCGG CGTTTGGGGG 
TTTAGTAGGA GCAGCTGGGT GTGTGTTGAT TGCTATTGTG TTAGGGATAA GGACTAGGGA 
GGATACGCGA GTAGTGGAAG TCGCTGATGA GGAGAGGTGT AACCCGCCTC TTTCGGAAGG 
GGTACCGGTA CTGGACTGAG CGAATCAGAT CGAGT 

 

Protein sequence

MSERTPLVPK ISQKSSGFLS NLDYVLILPA LLSNNFFAAF ESTIAASTQG AVGTEFNSSD 
HVAWVAISYL TVSTAVQPLY GRASDLFGRT RLYVLSLAVF ALGCLGCGLS NNLGQMIAAR 
AICGIGGGGL ITVSQVCAWD VLPMRLRPLY QAANNVTYGL GAALGASLGG ILSDSIGWRF 
AYFFPVPLTI FSIVVFLCRA SPKLLEIQAG KTNSFQKKDI DSLGSVLLMT SITLFMLVIN 
LGGSTIPWSS SANPILLVFS VITTLAFFQH EKRVKLPVLP INLLTNRRMV PQVGLNLFGA 
MTIFGTLYLI PVFFQTTLLT SASVASRRLL YPTLTAPIAS IVTGIFLHCH RRATARSY