Gene CNK02320 details

Gene Information

• Locus tag: CNK02320
• ID: 3254473
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006680
• Strand: +
• Start bp: 675536
• End bp: 677563
• Gene Length: 2028 bp
• Protein Length: 598 aa
• GC content: 52%
• IMG OID: 638253724
• Product: RAD57 protein, putative
• Protein accession: XP_567705
• Protein GI: 58260590
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0468] RecA/RadA recombinase

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTTTCTCCAT TAATCCAAAT CCAAATCTAC CTACAAATCC CTAATCTTCT CTCTTCTTGA 
TGCCCGCCCA CAGTATGCGC CCGAGATAAT GTCATTTACC TCTTTCCCCA TAGAAACTCT 
CGACTTGCCG AACAACTTTC GCGACGCTGC TCTCAAAGGT ACATATATAT ACTTCCCTCC 
CTATCGCCGG GTATGGAGAA AAAAAAAGAG GGCTAATATT ATCCTTTATA TACATAGCAA 
ACCTGACGAC GTCCACTATC CTCTTATCGC CAATACCAAA ATTGACAGAG CTGCTGAAAT 
GCAAAATCCC TTTTGCTCAA GATCTCGTGA AAGCCGTCTC GCAAGCGCTG GCCCCCAAAC 
CTGTCACTGT AGACGTTTCA TTTGACGATG ATTACGGTCA AGGAGCGTGT GAGAGGGGGA 
CAGGAGAAGA GATGGCTGGG AAAGGGAAGG GGAAGTGGAT ATCGACTGGC GATGAAGGGT 
TGGATGAGTG TCTGGGAGGG GGTTTGAGAC GAGGTTGTCT GTATGAGATT GCTGGAGAGA 
GGTATGGCCG ACCGCTTTGG TTGCAGATTA TATGGTTGGG TTTTGCTAAT CTTCCATTAC 
AGTGCGGCGG GCAAATCTCA CTTTGCTTTG ACTCTTGCCC TTTGCTGCCA GCTGTCGTCA 
CTCACGTCGT CCCCTGGCGG CTCTCTTATC CTTACATCCG AACGAGAGCT CTCCACCGAT 
CGACTGATCC AGCTCGGAGA ACCTCTGTTA GCCGTACATG AACCACGGGC AGAAGAACGG 
CCCGAGGGAG AGATTGATCC TCGCGTCAAG GGTTTACTGG ATAATATCCT GTCAAACAGA 
GTCAGCGATA TCGATGCTCT TGAACATGCG CTGAGCTACG TGATCCCCGC ACTCCTCGAA 
TCCCGGCTTA AAACATCATC ATCATCATCA TCCCAACCTT TTCCTTCTCG TTCACACCTC 
AAACCTATCA GGCTCATCAT CCTCGACTCT CTCACTGCCT TATTACGCGG CGGCAGCGCG 
TCTTCTCCTT CTACAAGGCC TGCAGCCACC TCCTCCTCCT CCCTGACAGA ACGGTCCAAA 
CATTTATGTG TGGTGGCAGA TCTGCTCAAG GCGCTGGCGG CGAGGTACGA TTTGGCGGTT 
GTGGTGATCA ACCAAGTATC GGACGTTTTC CCGCGACAAC AACACTCGTC TTCGTCGGGT 
GTGGTGGCGG CGTATAGTTC ACCTTTGATG CTGGCGGGTA CGCCCCCTAG TAGTGCGTGG 
GACCAGACTC AGCCGTTTGG GCCTGGTATG GCTCAGCAGC AACAACAAGG AACAAGTAAT 
GCAAGTGGAG GTGATCCCCC GATGCTTTAC GCGAGTCAAT CACGCTGGTT TTCCGGTCAG 
AGCGATGTGT TGAACAAGGA AGCTAGTTTG GGTATCGTGT GGGCAAACGC GGTCAACGTA 
CGGATTATGC TGTCAAGAAC TGGTAGGAGG AGGATGTTGG ATCAAGATGA TCTGAGGCCG 
GTAAAACGAC GGCGGCCAAG AGAAGACGAT GATGATGAAG AAGAAGACGA AGCTGGAATT 
GGAGCTGGGG CTGATGAAAA AGGAGAGAGA AGGAGTCGCA TCCAAATCGA CAAAGCAAAG 
CCTACACTCA TCAGGCGGAT GCACGTTGTC TTCTCTCCCT TTTGCCCAAG CGGCACGGTC 
GACTACGCCA TCACCCCTAG CGGGATCCAT TCCCTACCAG GCAGCTACGA GCCGATTAAT 
ATCGTGGAAA ACATGCGGAA AGTATGGGGC AGTGGGAAAG GTATGCAAGG GCCGGCGGGA 
GTCATGGCGG GTACTGGGGA TGTAGGCATG GGATGGGGAG GGATACAGAA GGAGGAGGGC 
GGGGGCCTGG GTGGGGATGT GTTTGATGAT TATGGGGAAT TGCCGGCAGA GTATTGGGAT 
GCGGTGATAG CTGGAGAGAC TACGGCGCCT GAGCCGTCTG TGACGGAAGA GACTGATGAG 
CGTGTTGTTA ATGAAGCGGA TGTGGTAGAA GAGACCGGAC CATAATGT 

 

Protein sequence

MSFTSFPIET LDLPNNFRDA ALKANLTTST ILLSPIPKLT ELLKCKIPFA QDLVKAVSQA 
LAPKPVTVDV SFDDDYGQGA CERGTGEEMA GKGKGKWIST GDEGLDECLG GGLRRGCLYE 
IAGESAAGKS HFALTLALCC QLSSLTSSPG GSLILTSERE LSTDRLIQLG EPLLAVHEPR 
AEERPEGEID PRVKGLLDNI LSNRVSDIDA LEHALSYVIP ALLESRLKTS SSSSSQPFPS 
RSHLKPIRLI ILDSLTALLR GGSASSPSTR PAATSSSSLT ERSKHLCVVA DLLKALAARY 
DLAVVVINQV SDVFPRQQHS SSSGVVAAYS SPLMLAGTPP SSAWDQTQPF GPGMAQQQQQ 
GTSNASGGDP PMLYASQSRW FSGQSDVLNK EASLGIVWAN AVNVRIMLSR TGRRRMLDQD 
DLRPVKRRRP REDDDDEEED EAGIGAGADE KGERRSRIQI DKAKPTLIRR MHVVFSPFCP 
SGTVDYAITP SGIHSLPGSY EPINIVENMR KVWGSGKGMQ GPAGVMAGTG DVGMGWGGIQ 
KEEGGGLGGD VFDDYGELPA EYWDAVIAGE TTAPEPSVTE ETDERVVNEA DVVEETGP