| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNK01830 |
|---|
| Symbol | |
|---|
| ID | 3254710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006680 |
|---|
| Strand | - |
|---|
| Start bp | 535709 |
|---|
| End bp | 538689 |
|---|
| Gene Length | 2981 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638253676 |
|---|
| Product | protein-vacuolar targeting-related protein, putative |
|---|
| Protein accession | XP_567662 |
|---|
| Protein GI | 58260504 |
|---|
| COG category | [Z] Cytoskeleton |
|---|
| COG ID | [COG5277] Actin and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0158802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATTCCGAACA ATACTTCAAT CTTGTACACC TCAGAACGTC TCAGCACCGT CCACCATGCC
TGACAACCTA ATAGACATCC CCGAAATTCG TTTCAATGGG GAACCCCAAC CAGTCTTTGA
CTACCACTCT CTAGACGGAC AGTCTCCAGC AATCTGTATC GACAACGGTA TGATGAGCTC
TTTACCACGC CCAGTCGCCA CTAACCCTCA GAGATCCATA GGCGCTCATT CATGGAGAGC
TGGGTTTAGC TCAAGTTCAA CTCCCTATAT TGACCGCATC AATATGGTGT CCAGATATAA
AGAGCGTAAA TTCGGAAAGA ACGTCCTGTT GTTCGGCGGA GACACGGATG CCGATGCCAA
TTCAAGGTCC AATGCCAGAT CGATGTTCGA TGGAGATTTG TTAATACAGG GAGACATGTT
GGTGAGCTCC TTTCCGTCAT GGCGTACGAA TGAAGTGACT CAGCAGGATG GGTAGGAATG
TGCTTTGGAC TTTACATTTT GTCAGTTAGG GATTGACACT CCTCAAATAC AACATCCTAT
CGTCATGACT GAAAGGCTGG CGAATCCATT GTTCAGTAGA GCTAGTAAGT AATACTCCAT
CACATGAGAC AGGTTGACTA AAACCTACCG AAGTGACCTC TGAGCTTCTC TTTGAACTGT
ATAACGCACC ATCAGTAGCA TTTGGTGTAG ACTCGCTTTT TGCGTTCTCT CGACAAGGCA
AGAAGGATGG TTTAACTATA AATCTCGGTC ATCAAGCTAC GACAATTATA CCCATATTTG
ATGGTCAAGC CTTGGTTAAT CGGTCAAAGC GGTATGACGG TTCGGCTTGC CTGGTTATAT
GTATAATGCT CATATTGTTT TAGTATACCA TGGGGAGGCT CTCAAGCATC TGAATTGATG
CTCAAGCTTG CTCAGCTCAA GTATCCATCT TTTCCTGTCA AAGTAACTCA ATCCCAAGCT
ACAGTATGTC TCAAACCAGC ATTTAACAAA CCTCGAAGTG ACGGGATTCT TCATTAGTTC
ATGTATCGCG AGACTTGCTA TTTCTCTACC GATTACGATG AGGAATTGCG GACTTTGGAA
GTCCCGGCTA ATCTTGCCGC TATGACCAAG GTCATTCAGT TCCCTTACAG CAAGACTGTA
AGTTTTCTCC GTTGTTGATA TGAAGACAGC ATCTGAATGG AAATTTTTGA AGGAGGCAAC
TGAGAAAACG GAGCAAGAGA TTGCTGCGGC TTTGGAACGA CGTAAAGAAT CAGGAAAGAG
GTTGCAAGAG CTGCAAGCGA AGAAGAGAGC AGAAAAGGTA TGTCGTTCTA GACGTTTTCC
AGTATCCCAT TTCGTGCCTA ATATCTAATA TCTTCAAACA GCTTGCTGCT ACCATCGCCG
AACTTGAGAA GTATAAGCTT CTTCTCTCCG AACGGCCCAC CATGAGAAAA GCCGATTTCC
TCACAAAATT ATCGGAAGAC ACTCCCTTTG ACACTGAAGC CCAGTTGGAA AGCTGGGTCA
AACGCACAGA AGCCGACGTC CGCAAGAAGC AGCGCAAAGA CCTGGGATTG GAAGAGGAGC
CAGAGGAAGT GCCGACGTTC CCGTTGCTCG AAAGGCCGGA TGAGGAGTTA AATGAAGATG
AATTGAAGGA GAAGAGGAGG CAGCGGCTAA TGAAGGGCGC ATGGGATGCG AGGATGAAGG
CGAAAGAGGA GAAGCGGAAG GAAAGAGAGC GTATGGTGAG CTATTCTTTA TGCTCTGTTG
TTTAGGGTGA TGTTGACATT ACCACGCCAA TAGGAAGAGG AAAAGAGGAA AGAAGAAGAG
GAAAGAGAGA CGAACCTAGC TGGCTGGGCG GCGAAGTTGA AAGATCAGCA AGACGTGAGA
TCATTTCTTT TCCCTTCCAG TTGCAAATTT GATTGTTGAT CTCTGTTCTG TCAGGCGGTT
ATCAACCGTA TGCAAGCACG TAAGAAGAGG AAGGCGCAAC TGGGTGACAG GAAATCTGCG
GCATCTCAAA GCAGAATGAA GCACATTGCC AACTTGGCCG CGGAAGAAAA AATAAGCAAG
AAGAGAAAGA AGGGGGAAGG TGGGTATTCT TGGATCACAA ACACGTGCAA AACATGACTG
ACTTTATGAC CAGATGATGA TGGGTTTGGT ATGGATGATT CTGACTGGGC AGTCTATCGT
GCAATGGTGA GTGCATTTGT ACATTTTGCT TAGTATTGAA ACTGAACAAT TCCATAGGAA
GGAGAGGAGG ATTCAGATGC AGAGGAAGAC GATAATAACC TCCTTCAATC CATTGAAACC
CGTTTACTAC AATACGACCC TACTTTCACA GAAGACCAAA CCATGCTAGG GAGAGCAGAA
GCCAAAAACA GACTTATCAA CGCTTTTGTC CGCGGTGGCA ACTCGGAAAA GTTTGATCCC
GAAGATGTTC GTCAAAATCA TCAACTACAC TTGAACATTG AAAGGATCAG AGTACCCGAG
GTGTGGTTCC AGCCTAGCAT TGTCGGGCTT GATACGGCGG GTGTGGGTGA AGTGGCTGGG
TGGATTTTGA ATGGTTTCGG CGAAGAGGAA AGGAAGAGGT TAATGCAGGC AAGTTTCCCA
TGGCAAATAT GTTGGATGTA ACCGGGTCAC TGACAGGAAG CGGATTCCAT AGGGTATCTT
TGTCACTGGC GGAGGCGCTA ACATCCCGAA TTTGATTCCC AAATTACGCC ACGTCCTTAC
GCCTATCCTT CCCTTCCGGG CTCCTTTGAA AGTCGTCTCT TCACTGGATG GAGGTGACCC
AAGGTTAGAG GCTTGGAGAG GTATGGCTCA ATGGAGTGCC ACTGAGGAGG CGAAGCAGGC
AATGGTCACG AAGGCAGAGT ACGATGAGCA TGGTGGAGAG TGGTTGAAAG AGCATCGATG
GGGCAATGTG GCTCCATAGA CAGCCTGTTG TAATGGAGAA CATTACCATG TATAGACTTA
CTAGCAAAGA AGGTAAACTT TGCTTCAATA GCTGTGTTTC A
|
|---|
| Protein sequence | MPDNLIDIPE IRFNGEPQPV FDYHSLDGQS PAICIDNGAH SWRAGFSSSS TPYIDRINMV
SRYKERKFGK NVLLFGGDTD ADANSRSNAR SMFDGDLLIQ GDMLECALDF TFCQLGIDTP
QIQHPIVMTE RLANPLFSRA MTSELLFELY NAPSVAFGVD SLFAFSRQGK KDGLTINLGH
QATTIIPIFD GQALVNRSKR IPWGGSQASE LMLKLAQLKY PSFPVKVTQS QATFMYRETC
YFSTDYDEEL RTLEVPANLA AMTKVIQFPY SKTEATEKTE QEIAAALERR KESGKRLQEL
QAKKRAEKLA ATIAELEKYK LLLSERPTMR KADFLTKLSE DTPFDTEAQL ESWVKRTEAD
VRKKQRKDLG LEEEPEEVPT FPLLERPDEE LNEDELKEKR RQRLMKGAWD ARMKAKEEKR
KERERMEEEK RKEEEERETN LAGWAAKLKD QQDAVINRMQ ARKKRKAQLG DRKSAASQSR
MKHIANLAAE EKISKKRKKG EDDDGFGMDD SDWAVYRAME GEEDSDAEED DNNLLQSIET
RLLQYDPTFT EDQTMLGRAE AKNRLINAFV RGGNSEKFDP EDVRQNHQLH LNIERIRVPE
VWFQPSIVGL DTAGVGEVAG WILNGFGEEE RKRLMQGIFV TGGGANIPNL IPKLRHVLTP
ILPFRAPLKV VSSLDGGDPR LEAWRGMAQW SATEEAKQAM VTKAEYDEHG GEWLKEHRWG
NVAP
|
|---|
| |