Gene CNK01220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK01220 
Symbol 
ID3254385 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand
Start bp368318 
End bp369687 
Gene Length1370 bp 
Protein Length391 aa 
Translation table 
GC content48% 
IMG OID638253612 
Productcytoplasm protein, putative 
Protein accessionXP_567807 
Protein GI58260794 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATCACTCGCC CATTATCAAC CAAAAAACCC ATTCCGTCAT GCAGACCTCC GATCCAGGCC 
ACCTCTTCCA AACAACCGCC CAACTAAAAC AAGCAGCTTC TCGAGAACGC AAACTTAAAG
CCGCCGAAAA AATCGGCAGC CCTATCACTT TGTCCAGCAA GGTACTTGCT CTCGAAATTA
GGGACAACGA TGCCTTCACC GCCGAGAGTG GATGGCAAGC TAGAAGAGTC GACCTCAAGG
TGCGTTTTAT CTCTCTCCTT CGCTTAGTCA TTCGCAGACC AGCTGACAAT GCGTAGACAG
GCAAGACCAT TCGGCTATAT CGCGGCCACC AAGGTCCTGT AACCAGTGTG GCGTTGATGA
GAATACAAGG GGAAAATCCT ACCGATATAT TGCTCACGGG TTCCTGGGAT AAGACCGTTC
GTGTCTGGGA TATCGACACT GGCGCGCACC TGCAGACTAT CGAGGGACAC ACCGATTTTA
TCAAGTCCCT CACCGTCATC CCCTGCTCCC CTCCCCTTTT GCTATCGACT TCATCCGATA
GAACGTGCAG ACTATGGGAT GTGTCCGAGG TTCTCAAAGG CAATGGCAGT GCAAGGAGTA
GTCAGATTTT GAAGGAGCAC ACAAGACCTG TGGAGTGCGC GACTTGGAAA GCAGATGTGG
ATGAGGATGG CAAGCCAATG GGAACAATCA CAGTCTGGAC TGGTGACTCT CTCGGTGTGA
TTAAGAAATG GAAAGTTGAG CAAGGCAAGC TGGTATACCA AGAGGATGTA CTAGGACATG
AGACCAGTGT TGCAAAGTTG GTCGTTGCGG AGGAAGGTTT ATGGAGTGGT AGGTTATAAT
TAAAGTCATG CCGCACTGGT CTTCTGACTT CCCTTAGTGT CTATGGACAA AATGGCTATA
CTTCACCCTT TTACAAATGC TTCAGCACTC ACCATTCCCC ACAACTCATA TGTCAAATCT
ATCCTTCCCT TGACATCTTT TGCCCTTCCC AATGCACATT CGCTTGTCTT GACTGGATCG
GAAGATGAAG ATATCAGGGT GTGGGACATT GAATCACAAC CTCACAGACT TAAAGGAACC
ATTCAAGGCC ACTGTGCTGA AGTGTCAGAT ATAAAGCCTT ACCTTAGAGA ACGAGACGGC
AAGCCTGAAC TAGTTGTTGT CAGTGCTGGT TTAGACGCGA CGTTACGGAC TTGGACCGTT
CAAGGTAAGT TTTATCATGT ATATCAAAGT GCACTTTCTG ATAATATTAC ACAGATATCC
TGAACCCCCC AGAACTGATG TGCGACGAAG CTGAAGAGAA GGATGCTGTT GGTTTAACAG
AAGAAGAAGA GAGGGAGTTG GCCGAGTTGA TGTCGGACGA GGAAGATTAG
 
Protein sequence
MQTSDPGHLF QTTAQLKQAA SRERKLKAAE KIGSPITLSS KVLALEIRDN DAFTAESGWQ 
ARRVDLKTGK TIRLYRGHQG PVTSVALMRI QGENPTDILL TGSWDKTVRV WDIDTGAHLQ
TIEGHTDFIK SLTVIPCSPP LLLSTSSDRT CRLWDVSEVL KGNGSARSSQ ILKEHTRPVE
CATWKADVDE DGKPMGTITV WTGDSLGVIK KWKVEQGKLV YQEDVLGHET SVAKLVVAEE
GLWSVSMDKM AILHPFTNAS ALTIPHNSYV KSILPLTSFA LPNAHSLVLT GSEDEDIRVW
DIESQPHRLK GTIQGHCAEV SDIKPYLRER DGKPELVVVS AGLDATLRTW TVQDILNPPE
LMCDEAEEKD AVGLTEEEER ELAELMSDEE D