| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ03090 |
|---|
| Symbol | |
|---|
| ID | 3254194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006679 |
|---|
| Strand | - |
|---|
| Start bp | 954272 |
|---|
| End bp | 960233 |
|---|
| Gene Length | 5962 bp |
|---|
| Protein Length | 1593 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 638253457 |
|---|
| Product | Glycogen debranching enzyme, putative |
|---|
| Protein accession | XP_567389 |
|---|
| Protein GI | 58259958 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3408] Glycogen debranching enzyme |
|---|
| TIGRFAM ID | [TIGR01531] glycogen debranching enzymye |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GGGGGATAAG AGCATCTCTT CCTCAGACAT CTCCTTCTCT CGACAATTCC CCATCCCCAG
TGTCCCTTTC ATCGGACACT CCTTCCTTCC ACGCCTTATT CGTTTACCAT CCTTCCAACA
ACTCGCTCAT CATCCCACTA TGACTATCCT CGACTCCCTC AAACCAAGCA ACATCGAGAT
CCCCAAGCCC AAGGCTGTCC TTCAGGGCGA TGGCAAGAAG ACTCCCAAGA CACCGCAAGA
TGAAGCCATT TCATTCTTCT CGAGAGAAGG AGATGGTGAG CCAGTGCAGG TCTGGGAACT
GTCGTTGGAG GATGACGGAG GCCCTAGTCC AGAAAAGAGT GTGAGCCTAT ATGTTCGGTG
CAGGACATGT GAATGACCTG GCTGACATAC ACACAGTACA TTCGACTTCC GCCTCCCTTC
AAGCCGTACG TCTTGAGGTT TACTCTTCAG CCCGGTACGG ATGTCACTCG CAATGGCGTG
CTTAAAAGCG ACTTTCCGAT GGACGGGGGC GCGTTTAAGC GGGATGACTG GAAAGAGCGA
AAGTTGCCCT CCAACCTGAG CAAGTGAGTG CTTCTGGTGC ATTGTAGCGT TTAAGAGAGC
TAATTCAGAT AGACCTATCG AGGTCGACCT TCCGATTTCC GCTCCCGGAG CATTCTGCTA
CTTTATCGAG TATGACTCGC CCGATTCCAC CGGTCGAGTT CAAGGCCGAA AAGGCTACTT
TAACGTTGAT CCCATCATCA CTCTTCCTGC TCGTACCCCA TTCTTCCCTC CCGATACCCC
CATCACATCT GGCCCTCTGA AAGATGAGTC TTCAGGTGCC ATCCTTCCCA AGGACAAGCA
GCTCAGTCTT GATGGTCTTA TCATCATCTC TGTTCTTGCT AAATGGATGG GCAAAACTAC
AGAATGGGAA CCATTCTTCG CGGAAGCTAG CAGAAGAGGC TACAATATGC TTCATTGGGC
GCCTCTTCAA CAAAAAGGCA TGTCTGGCAG TCCCTACTCT ATTCAAAACC AACTGGTCTT
TGATATAGAC CTTTTGAAGG ACTCCAAGGC GAAGGATGGT GGGGTAAAGG AGGTTGAAGA
AGTGTTGAAG TTTGCAAAGG AAAAGTACGG ATTGGGGGGT GTCACTGACG TGGTGTTAAA
TCACACTGCG TATGACTCGC CTTGGTTGCA GGAGCACCCT GAAGCTGGTA AGTCGTCACA
AAGGGGAGCG ATCGTTAGCT AAGTCAAATG TAGGTTATTC ACCATACAAC ACTCCTCATC
TCGCCCCTGC TCTCGAATTT GAGGATGCTC TGCTTGGCTT GACATCAAGG CTCTCGTCCG
TTGGTCTCCC CACCAACCTC AAATCCGAAT CCGACCTCCA GGCGTTAATC CCCCACATCA
AATCTTCCAT CGACGACGCC AAATTGTGGG AGTACTACAT CTTTGACGTC CAAGGTTCTG
AGCGTGCTGT TGCCGATTCT TTGCTCAATT CCAAGCCTGA AGCGCCCAAG CCTTGGGAGG
GATCTTCCCT TCAAGGCAAG TCACTCAATG AACTCGCCGA AATTGTCAAG TCTTCCGATA
TCATCACTTC TTATCGCGCT TACTCCTCTC GGTACTGCAC CTCTGTCCCT CCCGCTGTGG
CTGCAGGATT TATTCAAGCT GCTTACCCAG GTGATTCGGC AGAGAACCAA GCCAGTCGAT
GGGGCAAGAT CTTGGATGTG CTGAATGTGG ACCTTTATAA GGAATGTAAT GAGGATATCC
AGGCTGGTAT CGATGGTGTT GTGGGGAGGT TGAGATATAC TAGATTGGAG GAGGGTGGAC
CTAAGCTTGG AGAGCTTACC GAAGAGTGAG TTGTATTTCA ACTGCCATAG GCAGTAGTTA
ACAAAATCAG GCGGGCGATC CTGGAGCGCT ACTTCACTCG AATCCCCAAG AACGACATTA
CCAAGAAACA CCCCGAGAAT GCCCTCGCTG TCGCCAACAA CGGGTGGATG TGGGCTGCTG
ATCCTCTAAA CAACTTTGCC GAATACCCTT CTAAAGCCTA CCTCCGCCGT CAGGTCATTG
TCTGGGATGA TTGTGTCAAG CTCCGATACG GTTCTCAAGC TTCTGACAAC CCGTGGCTAT
GGCAGCACAT GATCTCCTAC GCCGAACTTC TCGCTGGGAT GTTTGATGGT TTCCGTTTGG
ACAATTGTCA CTCTACCCCG TTGCCCTTGG GCAAGGCCAT CATCGACGCT GGTCGACGAG
TGAACCCGAA TCTCTACGTC ATGGCTGAAC TCTTTACTGG AAGCCAGGAG ATGGACTTGA
AGTTTGTCAG GGAGTTGGGT ATCAACAGTC TCGTCAGGGA GGCTTACAAC GGCAACACTG
TCAAGAACTT TGCGGATCTC CTCTGGAGAT TTGGTCTTGG GAAGCCTGTG GGTTCTATGG
ACGTTGCATG CCTTACATCA TCAGGAGAAG TCCACCTTAG CCTTTCATCG TCAAAGTCCA
GCACCCGTCC GGCGCTTGTC ACCCCTCTTC AAGGCTCTGT GCCCCACGCA GTCTTCTATG
ACCTTACCCA CGACAACCAG TCCCCTCGAG ACAAGCGAAC TGCTGAAGAT GCCTTGTCTA
CAGGTGCTCT TGTGACCTTT TGTGCTGCCG CTTTGGGATC CAACAAAGGT TTTGATGACC
TCTACCCCAA GCTACTTGAT CTGGTCACCG ATAACAGAAA GTATGAAGTC ATTAGTAAGG
AGAAGGAGAA GTCTAGCGGT ATCGGTAATG TCAAGCGAGT GTTGAACGCC CTTCATGTGG
AGATGATGGA GGGTGGTTAC TCTGAAGGCT ACGTGCATGA GGACGGCGAG GTGAGTTTCA
TGATCGTCGT GCAAAATAAA AGGCTGATAA GAGTTTCAGT ACCTCATGAT TCACCGAATT
CACCCCGTCA CCCACAAGGG ATACATGCTT GTTGCTCATA CGGCTTACCC GGGCTTCAAA
GGTCGAGGAT GGGGTTAGTA AAACTCGATG TACAGTAGGG AGATACCACT GACTTTGTGT
ACATTAGTCA AACCCATTAG ACTCGGTCGA ACCTCTATCT CATATATCTT CGGTGCCTCT
ATCAAGACCC GCTTTGAAGA ATGGGAGGAC GACCCCTCTA CTCATCGTGG CATCCCGTCG
ACCCTTACAG AGATTGGCCC CCCTGAGATT ACCAAAGGCA TTGAGAATGG AGAGGAGTAT
CAAGAGGTTG TTGTGCCAGA AGATTTCGCT CCCGGAAGCA TCATGGTCTT TGCTACTCAG
ATGAGCGTGA GTGAACTTTG TGATATTTAG TCACGCTTGG CGACTGACAG CGTCTGCTTC
TATATAGGAT ATTTCTGGTG ATCTGGATGC GTTCTGCAAA GAAGGTGCTA TAGATGCTAT
GAGCCAACTG GACTTGGTGG ACCTCAACGT CATCCTCCAC AGGGCTGACG GTGAAGAGCA
GGATGCTACC GGTAAAGCTT CCACTACGTA CCTCTCCGTT TTCAGTGTAC TGACCCTTTT
TATCAAGGTG GTGATGGTAC TTACACTATC CCCAACTACG GCGCCATTAC TTTCTGCGGT
CTTGAAGGCT GGATGCACCC CTTGCGAGAG ATCACTAAGA AGAACGATCT CGGTCATCCT
CTCTGTCAAC ACTTGCGAGA AGGTACTTGG GCTTTTGACT ATGTTGTAAA CAGGTTAAAC
AAGTGAGTCA TTGCCGCAGC CACCGTGAGA ACTTGCTAAT ATTGATCAAT AGGCAAACCT
TTGATCTCCC TCGCCTTGAG GCTCCTGCCA AGTGGTTCGC TTCCCGCTTC GATCAGATCA
AGGCTACCGC CCCTTCTTTC ATGCGCCCAA AGTACTTCTC CCTCGTCATC CACGAAGCTT
ACAAGGCAGC TCGCCGAGCT GTTGTTGAGC AATGCTCTGA GTTTGTTTCT TCTGGCCATT
CGCTCACTCA CAATCTTGCC TTGTGCTCTG TGCAAATGTA TGGCTTGGTG AAGAGTGCCA
GCTTGGATCC CGGAAGAGCT GTGCCAAGTC TGGCAGCCGG CTTGCCCCAT TTCGCCGCTG
GTTGGGCTAG ATGTTGGGGA CGAGACGTCG TAAGTCGTCC TCTGAACGAA CGTGAGGTTA
AGGTCGCTAA TCAATGTCAT AGTTCATCTC TCTTCGAGGT CTTTTCCTTA CTACTGGTAA
CTATCCAGCT GCTAGGGCCC ATATATTATC CTTCGGCAGC ACTCTCAAAC ACGGCTTGAT
CCCCAACTTG CTCGACTCAA CGCGAAATCC CAGGTATAAC TGTCGCGATG GCCCTTGTTA
GTAGCGAGTC AAAAGACATT CCTGCCCCTG CTAATGATCT TGACAGGGTG GTTCATTCAA
AATATCCAGG ATTACACCCA TATGGCTCCC AACGGTTTGA CCATCCTCTC TGACAAAGTC
AAGCGCCGAT TCCCTGCGGA TGACACCTGG GTTGCTTGGG ATAGCCCCAG AGCGTACGAG
TATGAAAGCA GCGTCGCTGA ATTGATCCAA GAGATCTTGC AGAGGCATGC AGAGGGTATT
GAATTCAGGG AGTACAATGT AAGTAAAAAC CTGACGTTAT CTGGACTTCA GGCAACTGAC
AGTGATTAAT CAGGCTGGGC CCAACCTTGA TATGGACATG CGCGACGAAG GGTTCAACCA
GAAGATTTGG GTTGATTGGG AGACTGGAAT CATCTTTGGT GGCAACAGAT ACAACTGTGG
TACCTGGATG GACAAGATGG GTTCGTCTGA AAAGGCAGGT AACAAGGGCC TTCCTGCTAC
CCCCCGGGAT GGTGCTCCCA TTGAGATCAC CGGTCTACTC AAGAGTGCCC TTACTTGGCT
TGATAAGTTG AGCAAAGGTG GCAAATTTCC TTTTAAGGGC GTGAATGCTT CTGGTGAGTG
TCTAAATATG CTACGCAGGT CCGGGCTAAC TTTTTTCTCA GTCAAGGGCA AAAAGCGTCT
CGTGACGTAC AAAGAATGGT CTGACCTCAT TCAAGCCTCT TTTGAGAAGC ATTACTACGT
TCCCAGCGAC CCCGCTGAAG ACGATAAATA CGTTATCAAC AAGGGTTTGG TCAACCGCCG
GGGTATCTAC AAGGATGTAT TTGGAACTCC AAAGGATAGG GAGTGGAGTG ACTACCAGGT
GTGTATCTTT CAAATCAATT CTTCTTTACC ATACTGATCA TTTATCGTGT GTCAGCTTCG
ATGCAACTTC ACGCTTCCGA TGGTTGTCGC TCCTGAGCTT TTCACTCCTT CCAAAGCCAT
TGGCGCTTTG AGTATTGCCG ATGCTGTGCT TCGCGCTCCT CTTGGTATGA AGACCCTTGA
CCCTTCTGAC AGCCAATATC GAGGCGACTA TGACAACTCG AACGATGGTA CAGATCAAGC
CATTGCCAAG GGCTGGAACG TGAGTATAGC TAAGCGAATG ATTGGAACCC AGCTGACGGC
GATACTGCAG TATCACCAGG GCCCTGAGTG GGGCTTCCCT CTTGGTTGGT TCCTCATGGC
TTACCTCAAG TTCGACCGTC TCGCTGGTGA AGGCAAATCT GTAAGCTTCA CACCTGAATA
CCTCTGTGTA TCAGTGCTGA CCCTCTTTTT CTGACAGAAT CCCACCAAGA CTATGCATTA
CATCTCCAAT ATCCTTAGGA ATCTCGCCCG CCACATTGAA AGTGACCCAT GGCGAGGCTT
GCCGGAGCTA ACCAATAGCA GTGAGTGTCC TCCCAGGTTG TTTTTGGTTT GCCTTTTACG
CTGACAACTA CATCAACTAA GATGGAAGCT TCTGCTATGA CTCCTGTAAC ACTCAGGCAT
GGAGCGCAAG TACGATTCTC GATGTATTGG AGGAAATGCA CAAGATTGGG AAGAATTAGG
TACCGAAAAG TGATTGTAAA AATGCCAAAG ATGCTTAATG ACTTGTGAAG GGAAGTAGGA
AGACCAATGA GAAAAGCTTG TTTTCAGAAA TTTCTTAGAT GTATTGCATA TGGACTTTGG
AATGAATATC AATCCCCAAT CT
|
|---|
| Protein sequence | MTILDSLKPS NIEIPKPKAV LQGDGKKTPK TPQDEAISFF SREGDGEPVQ VWELSLEDDG
GPSPEKSYIR LPPPFKPYVL RFTLQPGTDV TRNGVLKSDF PMDGGAFKRD DWKERKLPSN
LSKPIEVDLP ISAPGAFCYF IEYDSPDSTG RVQGRKGYFN VDPIITLPAR TPFFPPDTPI
TSGPLKDESS GAILPKDKQL SLDGLIIISV LAKWMGKTTE WEPFFAEASR RGYNMLHWAP
LQQKGMSGSP YSIQNQLVFD IDLLKDSKAK DGGVKEVEEV LKFAKEKYGL GGVTDVVLNH
TAYDSPWLQE HPEAGYSPYN TPHLAPALEF EDALLGLTSR LSSVGLPTNL KSESDLQALI
PHIKSSIDDA KLWEYYIFDV QGSERAVADS LLNSKPEAPK PWEGSSLQGK SLNELAEIVK
SSDIITSYRA YSSRYCTSVP PAVAAGFIQA AYPGDSAENQ ASRWGKILDV LNVDLYKECN
EDIQAGIDGV VGRLRYTRLE EGGPKLGELT EERAILERYF TRIPKNDITK KHPENALAVA
NNGWMWAADP LNNFAEYPSK AYLRRQVIVW DDCVKLRYGS QASDNPWLWQ HMISYAELLA
GMFDGFRLDN CHSTPLPLGK AIIDAGRRVN PNLYVMAELF TGSQEMDLKF VRELGINSLV
REAYNGNTVK NFADLLWRFG LGKPVGSMDV ACLTSSGEVH LSLSSSKSST RPALVTPLQG
SVPHAVFYDL THDNQSPRDK RTAEDALSTG ALVTFCAAAL GSNKGFDDLY PKLLDLVTDN
RKYEVISKEK EKSSGIGNVK RVLNALHVEM MEGGYSEGYV HEDGEYLMIH RIHPVTHKGY
MLVAHTAYPG FKGRGWVKPI RLGRTSISYI FGASIKTRFE EWEDDPSTHR GIPSTLTEIG
PPEITKGIEN GEEYQEVVVP EDFAPGSIMV FATQMSDISG DLDAFCKEGA IDAMSQLDLV
DLNVILHRAD GEEQDATGGD GTYTIPNYGA ITFCGLEGWM HPLREITKKN DLGHPLCQHL
REGTWAFDYV VNRLNKQTFD LPRLEAPAKW FASRFDQIKA TAPSFMRPKY FSLVIHEAYK
AARRAVVEQC SEFVSSGHSL THNLALCSVQ MYGLVKSASL DPGRAVPSLA AGLPHFAAGW
ARCWGRDVFI SLRGLFLTTG NYPAARAHIL SFGSTLKHGL IPNLLDSTRN PRYNCRDGPW
WFIQNIQDYT HMAPNGLTIL SDKVKRRFPA DDTWVAWDSP RAYEYESSVA ELIQEILQRH
AEGIEFREYN AGPNLDMDMR DEGFNQKIWV DWETGIIFGG NRYNCGTWMD KMGSSEKAGN
KGLPATPRDG APIEITGLLK SALTWLDKLS KGGKFPFKGV NASVKGKKRL VTYKEWSDLI
QASFEKHYYV PSDPAEDDKY VINKGLVNRR GIYKDVFGTP KDREWSDYQL RCNFTLPMVV
APELFTPSKA IGALSIADAV LRAPLGMKTL DPSDSQYRGD YDNSNDGTDQ AIAKGWNYHQ
GPEWGFPLGW FLMAYLKFDR LAGEGKSNPT KTMHYISNIL RNLARHIESD PWRGLPELTN
SNGSFCYDSC NTQAWSASTI LDVLEEMHKI GKN
|
|---|
| |