| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ02960 |
|---|
| Symbol | |
|---|
| ID | 3254244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006679 |
|---|
| Strand | - |
|---|
| Start bp | 920666 |
|---|
| End bp | 923263 |
|---|
| Gene Length | 2598 bp |
|---|
| Protein Length | 669 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | 638253445 |
|---|
| Product | cytoplasm protein, putative |
|---|
| Protein accession | XP_567575 |
|---|
| Protein GI | 58260330 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2102] Predicted ATPases of PP-loop superfamily |
|---|
| TIGRFAM ID | [TIGR00290] MJ0570-related uncharacterized domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0491922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GAATATAGTC CCACTTGAAA ATGAGCAAAC TCCCGGGGGT AAAGCATAAA GTCATTGGCC
TCGTATCCGG CGGCAAAGAC TCGTGTTTTA ATCTCATGCA CTGTGTCGCT AACGGCCATG
AGATTGTTGC TCTTGCTACG TTAACCCCTG AGCCTGGCAT CGGTGAGTTT TCTTCCCTTC
CCCAACAGAG TCCCTTTTGT TTCCATAGTC CACAAGCCAA TTAACGGTTG TAAGCAACTA
GATGAGCTCG ACTCGCACTT GTACCAATCT GTGGGGACCC ATCTGCTCCC GCTCCTTGCC
GAATCCATGT CCCTGCCCTT ATACACCAAG GTCATCCGGG GGAAAGCCAT CTCCCAAGGC
GCCGAATACG GTTCCCGCCT CCGCCTGGGC GCGGGCACTG GCCAAAAAGG CGATGAGACC
GAGGACCTCA CATGCTTGTT GTCCGACGTT CTGGAGGCAC ACCCGGAAGC GACGGCGTTA
TCGTCCGGTG CGATCTTATC GACGTATCAG CGCTTACGGA TCGAGCATGT CTGTGGCCGG
CTGGGTCTCA CGAGTTTGAG TTTCTTGTGG CAGAGTGAGC AGTCGCGTTT GCTTGATCGG
ATGCTGGGCA GCGGGGTGGA AGCTGTGATT ATGAAAGTTG CCGGGGTGGG CTTGGGGGTC
GGGGTGGTAG GCAAGCAGTT GGGGCAGATT AGGCCATTGT TGGCGAAGCT TGAGGCGCAG
TACGGTTCAC ATCCGGCCGG AGAGGGGGGT GAGTATGAGA CCCTCACGCT GTCGACCCCG
CTATTCTCGC ATCGGCTAAA GTTGGTCAAG ACGGAGACGG TAGTGACGGA TCCGGAACCG
TATACTGTTG CGTACCTCAA AGTGGAAGAG GCGGTATTGG AACCAAAGGA AGGGTGGGTG
AAGCCTACAG TGGAGGAGTT GAGGGGGATG TTGGGGCTGG ATGAGGAAGG GGAAGAGCAG
GTGGGGGTGG AAGGCCTGGA CGAGGAGGGG AAAGAGAGAT TGGAAGAGTT GGGCGAGAGG
GAGATGGAAG ACGTACGGAA AGAGGGAGGC GGGGTGGAGC TGGTGGAATG GAGTGCAGGA
GGCGTGGGCG TGGGCGGGGG AGAGGTGCAG TTTGTGAAAA AGAAGAGGTG GTTCACCGCC
AGCGTGCAAG GCGTTAGCCT CTCCTCTGAA GATGTAGGCC AAGAACTTGA AAAATGCTTC
AAAGCTATTT CCTGTAAGTC CTCCTCCATC AGCCAGTTCC ATCCCTTTTT GGCTAAAACC
GCGCCCAGCC AAACTGCAAT CGGAAAACCT CTCCCTCCCC CTCCACTCGA CTCACATTAC
CCTCCTCCTC TCCTCCATGT CTCTCTTCCT CCCCGCGAAC GAAAAGTACA AGACGTATTT
CGGTACGAGC CCTCCCTCCC GCGCGACTGT TGCTGTGCCC CTTTCGTCTG GGAGGGTGCG
CGTAGAGGTC ATCGGGTTTG ACGATACCCC TCTTCCCACG CCATCTTCTT CCGATGGCGA
AGGGAGAGGT TCGATAGGAA ATCGGTCAGC GCTCCACGTA CAAGGATTGA GTTACTGGGC
GCCGGCCAAC ATCGGCCCAT ACTCCCAAGC TGTCCTTGTC GCCTCCCGCC TTCATCTCGC
CGGCCAAATC CCACTTATCC CCGCGTCCCT CACTCTGCCG CTCGCACCGG CCTTACCGAA
ATCGCCGTAC CCGCATCAGG CGACGCTGGC GTTACAGCAT GTAGGGAGGA TAGTGCAAGC
GCTGAAGAGT CGGAATGCGA CAGGCGGTGG GTGGGAAGGG TGGGTGGAAG GTGCGGTGGG
GTGGTGGGCG AAGAGTGGGG ATGGGGAGAG CGGGGAAGGG GTACAGGTTA CGAGAGATGC
ATGGAGAATA TGGACTCGGC GTGTAAGTGT TCAGTGTGTA ACTTTTGCAG CAGTCTAATG
GAAGCTGAGA AAACAACAAC AACAACAGAA TGGAGGGGAG CGTGCGCCGA TAGCGTTTGT
TCAGGCGAAA GAGTTGCCCA AGGGAGCGTT GGTAGAGTAT CAAGTGAATT TGCATACCGG
ACGACGGGAC TATACTACCC AGGCCGCGAA AGAAGATGAA GGAGATGATG AGGAGGAGCT
TGAGCCTGTG TACGAGAGTG GGAAGGGACA AGGGGTATGG TGGGAAAGCT GTCATACGAG
TGGGAAAGTA CAGCGAGGAA GTCGGGGCTT GGTTTTTGTG AAAAGTGGGT CCAGGCGAAG
AAGAAAGATG AACTGACAAG CGGCGCAGAT GTCGATGCAT TCGCCAGCCT CTCCCAGCAT
AGAGAATCCG ATCGCAAACT GGGGTGTTTA CTCTCCAAAG CAGTGTCTAT TCGCGTCTAC
CACCTGGCCC ATCTCGATCC CGCTAGACGT AAGTCCAGAA CTCTGGAACC GGTTTTTTTC
CCGCGCGCTT TTTCATTCTT CTTTTTCGAG GGGCCGTTTT TTGGGCTGAC ATTCCCCATG
CGCAGTTTCG TCGGTGGTAC CGTCACTGGG CGGTGTCTGC ACGCTGGTTC CTGTGTTCTC
GGTGCATGAC CGGGACGGGG AGAGCGTGCA AGTTGCGCTG GAGGTGTTTG GGGAGTAGCA
GTAGTATAAT GGTGCATG
|
|---|
| Protein sequence | MSLPLYTKVI RGKAISQGAE YGSRLRLGAG TGQKGDETED LTCLLSDVLE AHPEATALSS
GAILSTYQRL RIEHVCGRLG LTSLSFLWQS EQSRLLDRML GSGVEAVIMK VAGVGLGVGV
VGKQLGQIRP LLAKLEAQYG SHPAGEGGEY ETLTLSTPLF SHRLKLVKTE TVVTDPEPYT
VAYLKVEEAV LEPKEGWVKP TVEELRGMLG LDEEGEEQVG VEGLDEEGKE RLEELGEREM
EDVRKEGGGV ELVEWSAGGV GVGGGEVQFV KKKRWFTASV QGVSLSSEDV GQELEKCFKA
ISSKLQSENL SLPLHSTHIT LLLSSMSLFL PANEKYKTYF GTSPPSRATV AVPLSSGRVR
VEVIGFDDTP LPTPSSSDGE GRGSIGNRSA LHVQGLSYWA PANIGPYSQA VLVASRLHLA
GQIPLIPASL TLPLAPALPK SPYPHQATLA LQHVGRIVQA LKSRNATGGG WEGWVEGAVG
WWAKSGDGES GEGVQVTRDA WRIWTRRNGG ERAPIAFVQA KELPKGALVE YQVNLHTGRR
DYTTQAAKED EGDDEEELEP VYESGKGQGV WWESCHTSGK VQRGSRGLVF VKNVDAFASL
SQHRESDRKL GCLLSKAVSI RVYHLAHLDP ARLSSVVPSL GGVCTLVPVF SVHDRDGESV
QVALEVFGE
|
|---|
| |