Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNJ01540 |
Symbol | |
ID | 3254084 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006679 |
Strand | - |
Start bp | 448442 |
End bp | 452751 |
Gene Length | 4310 bp |
Protein Length | 1063 aa |
Translation table | |
GC content | 47% |
IMG OID | 638253312 |
Product | hypothetical protein |
Protein accession | XP_567334 |
Protein GI | 58259843 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5021] Ubiquitin-protein ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ACAGACTACA AAGTTTCTGA CAAACAGACA GCCCAGGGCG TAAAATGTTC GACCCAGCCT TCCTTTTGTC CAATTCGAAG AGCAACAATG TCAACCTCTC AACCAGCACG TCCACAAGTT CGTCGGACTT ACTAAGCTCT GTCCGGGCAG AACGACTCGC TCGAGAAGAA AAGCGTCATC AAGAATTGGC GGCTATCGAA ATACAAAAAG TATGGAGAGG AAGGAAGGTG GCACGGGACT TCAGAGAAAG GATATTGGAT GATCTGGAGA GGAGCCTGGG AATAGAAGGA GGGCTCAATG TTGAAAAGGG GGGGAGAGAG ATGGTGGTGT TGTTGAGAGA TGCCAAAAAC AAAAAGGACA CAGATCGAAA ACAGATCGTG TCAGCCAATT GGTGCGATCT TGGTCTCCAG GTAAAAGGTC TGTCACGTTT CTTTTTATAT CCAGTTGCGA TAGCTCAGCT AACGCTGCAT TTGTCCTAGA TGGAAGACCG AATCTCGTTG AACCATTAAA TCGCGACCCC GGGTGGGGTC GGATACTGGG TCTGCTTAGC ATAAGGCTAT TGCATGTAGT AGATTGCAAT CCAACGTGAG TATATTTCAA TTATCATATC GTCCTCGAGC TTATTATTAT GCCAGCACTG TACATGTTCC TTCTATATTA TCCGGGCTGG AGGCAATTGC CGACCCTTCC TCTTACACCG GATTCCCAGC ACAGCTGGCC GACACCGCTC GATATGAATG GCTAGAAGCT ATTCTAAATA ACCAATGGGT CGACAAACTC GTGTCCATCC TGTCGAAATT GATATCAGCA AGCGTGAGTT GACTCATCTA TCTCCATGTT GATAAAGACT GATTTTACGA AGTTACCTAA GAAGAAACAT CCGTCCATCT CACCCATCAT CAGGCTTCTT GCTTCCCCGC TGTCGGCAGC TTCTCCTTCT CAACTCGCTC CCGTCCTCGC ACCAATGGTC AACCAACTCT TTGCTATTCC CAATCTTCCC TCTTCGTTAC CCTTACAAGC TTTGACATAT TTATCTGCCA ACTTCCATAT TTTCGACATT GTGATCCCGT TTGCATCACA AAACCCCCAG ATTTTGACCG AAGGTCGACT GTCGGATGAA CTGGGCAAGA CTTACTTCCT CGCTAATCTC GTGACATTTG GCATATCTGG CCAGCTGCTT TCTCGGAGCG GTATTCATGG TGCAGCCGCT TGGATGAGCG TCGTTGGAGC TGTTCTAAGC CAAATGCATG ATGGCTGGGG GAAATGGATT GAGGGGAGCA CACAAGATGA GGACGTAATC ATGGAGCCAA TCGTGGAAGA CAGTGATGAT GAGATACCTG ATGACACGGT TGTTATGCCT TCGCGTAAAC CACCCCGTCC TCGAAGAATC CCGCTTCCCC TGACGATTTG CTCAAAGCTC GTGCTTTTAT CAACTGCGTC TCACATCTCG ATTTTGACAC AGTATATCCT TTCCCTTCCA AGGGGTGCAC CCGCAACTCT TCTGATCGAT TTCTCTTCCT TTTTTTTAGG GATGCTGAGC GCTTATCGGG GCAGTCCGAA GTGGGAGGCT GTATTAGATT CCCTTGTAGA CGGGAAAAGG GGACTGGCGT TGCTGAAAAG CATCTGGAGA GAAGGTGTAA GAGGCAAATG GGAAGGTACT GAGGATCGTT CTGCTTGGGA ACAATTCTCA GACAGTGAGT TACAACACGT TCTATAGGAA AGGATATTGA CTAGTGACCC AGATCCTGTC GCCCCATGCC TCCTTCTGTT GACTCACATG TACTGCCACT ATCTTCTCCT CACGCCCGAT GATGAATTTT TCTCCCCTGA TCGCAACCCC TTCAACACAG ACGAAGTATT GCAACTCGCA GCTATCTGGA GGGATCTTGC CTACTGGGGT TACATCAGTG GAGTCTCATC TCCTGGAGGA GCTCCGAATG GTAAAGGAAG GGACAGGAGA GGGAACGAAG AGGCGAGAGC ATTGTTTACC AAGGGAGTCA CTCGCGTTGT TGAAAGAAAG TAAGTCTGAT TCTATTTTAT TCGACGTAGG AAAGGAAGCT CATTTGTGTG CTCGCAGTGC GAGACGACAG TTCGCCAGGT CCGATTTCTG GGTCATGAAA ACCCAAATGG ACATGCAGGG CTTCGTCGAA GCAGCTGTGT ATGTTTTGCC ATCAAAGATC GTTCGCGGCT GACGAAGGAT TCATCAGCTA TGAAGATGCT GAGCTTTCTG GTCTGAACGA TGAAGAAAGA GACGTCACCT CTGATACTTT GCCCCGCTGG GCTCGGGCGC GGCATAGATA TAGCAAGCGT CAAATGGCAT ACATCTCTCC AAGACTGGGC CTACTGAACA ACTTACCCAT GGCTGTCCCC TTCGAAACCA GAGTGCAAGT TTTCCAGATG TTCATCGAGT AAGTGTTGTT CTGCACATTG GAAACTGCTT AACAAGTCGA GTAGGGCGGA CAAGGCAAAA CTCGGCATCG AATACCACGG TAGAATGTTC AGATCCTCTG CCAAAATCAG AAGAGACCAT GTAGCCCAGG ACGGGTTTGA CGAACTATCT AACTTGGGTC CAGCCTTGAA AGGGAGGGTC GATATAACTT TTGTCGATCA GTATGGAATC ACTGAGGCGG GCATAGATGG CGGTGGGTTG TATAAAGAAT TCTTAACTAT GTAGGTTATC ATTTGTATGG AAAAAGGACA TTGCTGACGA GTTGAGCCAG TTTGTCGAAG GAAGTGTTTG ACAGCAATCG AGGGCTGTGG CTGGTGACCG ATCAAAATGA GCTTTATCCA AATCCGCATT CTTATGCGTC TGAGTGTAAG AAGTACATAA CCATTGAAAA CAGCTATGCT AACACCAAGT CTACTAGCCC ACAATCTGAG TTGGTATCGA TTTGTGAGTT GCTTTGGTAG TGTGTGAGCA CTTGGACTTA TTAGCTATCT AGATTGGTCA GGTGTTGGGT AAAGCCATTT ATGACGGGAT ATTGGTCGAT GTCACCTTCG CTGCATTTTT CTGTGGGTAA TTGCGTTGTC CTGAGGATGA AGTGATCTTA CGATTTGGCG ATAGTGGCCA AATGGCTCGG AAGACAATCT TATTTAGACG ACCTCGCGTC TTTAGACAAA GATCTCTACA AGGGCCTTAT TAGTCAGTGT CGATGTCCCC AGCACAGAAC CACATGTTGA CAGTACACGT GTAGTTTTGA AGAACGATCC TAAGCCGGAG GATATGGCGC TGACATTTTC CACTACCATT GAGGGTGGGT GTCTACCAGC ACTCACAGAG ACTGTGATGT TAACATCTTG ACTAGAATTC GGTGTCCAAA GACAGATTGA CCTTGTACCT GGAGGCTCCG ATATACCTGT CACAGCAGAA AACAGGCATG AATGTGAGCA AAAACATCTA TCGCTTATTG TATACCTGCC AACAGACAAT GTAGACATTC AACATGTCTG TAAGTACAAG CTAGATAAAC AAATCGCAGC GCAAAGCAAA GCCTTTTTCA TTGGTCTCTC GGATCTTCTT GATGCAAAAT GTGGGTTCAT TACCATGTGG TACAATCCAG TGCTCATATA AGCTACAGGG CTGCGAATGT TCGACCAGCA AGAGCTCCAG CAACTAATCG GAGGCGAAGA GGTCAGTCGC ATTTAATTTC TTCGTTAAAT TAATGTTGAT GCCTGTCATA TATCCTAGAA ACCTATCGAT CTCAAGGATC TCAAAGCTCA CTGCAACTTC GATGGGTTTC CGAATGATGT CACCCCAGCC CTTTTTTGGA AGGTGGTTCA AGGATTCACG GAAGAGCAAA AGAGGGCCCT GTTGCGTTTT GTCACGAGTT GTTCTAGACC GCCGCTGTGA GTTTTTCATC GGTTTTAAGT CAAATGTACA AGGTGACTGA ACCCGTGGTA ATCAGACTTG GATTTTCGCA GCTGAACCCT CAATTTGGAG TGCGGTTTAA CGGAGGGGAC ATGGACAGAT TGCCGTCGGC CTGTAAGTCT CAGAATGAAG AGCAGGTGGT GGACGTGCTA ATAAATCGTA GCTGCCTGTT TCAATCTTCT GAAATTGCCA GGCTATACTG TACGTTTCGA ATAAACTTCC GAGCAAGCTT GTTCTCTAAC CTGATCATGC CAGACTGAGG CGACTTTGCG AGCTAAACTT CTTCAGGCCA TCAACTCCGG AGCGGGATTC GATATGTCGT AATCATTGTT GATGTTCCAA ATATGTAGGA CCAGATATCT TTTATTCGTT TGTGAGATAT GACATTTGTA TAGCTTTTGT GTGAGTGGAC TGCGGGCACT CAAGAGTTTC ATGTTTTATG
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Protein sequence | MFDPAFLLSN SKSNNVNLST STSTSSSDLL SSVRAERLAR EEKRHQELAA IEIQKVWRGR KVARDFRERI LDDLERSLGI EGGLNVEKGG REMVVLLRDA KNKKDTDRKQ IVSANWCDLG LQVKDGRPNL VEPLNRDPGW GRILGLLSIR LLHVVDCNPT TVHVPSILSG LEAIADPSSY TGFPAQLADT ARYEWLEAIL NNQWVDKLVS ILSKLISASL PKKKHPSISP IIRLLASPLS AASPSQLAPV LAPMVNQLFA IPNLPSSLPL QALTYLSANF HIFDIVIPFA SQNPQILTEG RLSDELGKTY FLANLVTFGI SGQLLSRSGI HGAAAWMSVV GAVLSQMHDG WGKWIEGSTQ DEDVIMEPIV EDSDDEIPDD TVVMPSRKPP RPRRIPLPLT ICSKLVLLST ASHISILTQY ILSLPRGAPA TLLIDFSSFF LGMLSAYRGS PKWEAVLDSL VDGKRGLALL KSIWREGVRG KWEGTEDRSA WEQFSDNPVA PCLLLLTHMY CHYLLLTPDD EFFSPDRNPF NTDEVLQLAA IWRDLAYWGY ISGVSSPGGA PNGKGRDRRG NEEARALFTK GVTRVVERNA RRQFARSDFW VMKTQMDMQG FVEAAVSFAA DEGFISYEDA ELSGLNDEER DVTSDTLPRW ARARHRYSKR QMAYISPRLG LLNNLPMAVP FETRVQVFQM FIEADKAKLG IEYHGRMFRS SAKIRRDHVA QDGFDELSNL GPALKGRVDI TFVDQYGITE AGIDGGGLYK EFLTILSKEV FDSNRGLWLV TDQNELYPNP HSYASESHNL SWYRFIGQVL GKAIYDGILV DVTFAAFFLA KWLGRQSYLD DLASLDKDLY KGLIILKNDP KPEDMALTFS TTIEEFGVQR QIDLVPGGSD IPVTAENRHE YIQHVCKYKL DKQIAAQSKA FFIGLSDLLD AKWLRMFDQQ ELQQLIGGEE KPIDLKDLKA HCNFDGFPND VTPALFWKVV QGFTEEQKRA LLRFVTSCSR PPLLGFSQLN PQFGVRFNGG DMDRLPSASA CFNLLKLPGY TTEATLRAKL LQAINSGAGF DMS
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