| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ01540 |
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| Symbol | |
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| ID | 3254084 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006679 |
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| Strand | - |
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| Start bp | 448442 |
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| End bp | 452751 |
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| Gene Length | 4310 bp |
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| Protein Length | 1063 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638253312 |
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| Product | hypothetical protein |
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| Protein accession | XP_567334 |
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| Protein GI | 58259843 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5021] Ubiquitin-protein ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ACAGACTACA AAGTTTCTGA CAAACAGACA GCCCAGGGCG TAAAATGTTC GACCCAGCCT
TCCTTTTGTC CAATTCGAAG AGCAACAATG TCAACCTCTC AACCAGCACG TCCACAAGTT
CGTCGGACTT ACTAAGCTCT GTCCGGGCAG AACGACTCGC TCGAGAAGAA AAGCGTCATC
AAGAATTGGC GGCTATCGAA ATACAAAAAG TATGGAGAGG AAGGAAGGTG GCACGGGACT
TCAGAGAAAG GATATTGGAT GATCTGGAGA GGAGCCTGGG AATAGAAGGA GGGCTCAATG
TTGAAAAGGG GGGGAGAGAG ATGGTGGTGT TGTTGAGAGA TGCCAAAAAC AAAAAGGACA
CAGATCGAAA ACAGATCGTG TCAGCCAATT GGTGCGATCT TGGTCTCCAG GTAAAAGGTC
TGTCACGTTT CTTTTTATAT CCAGTTGCGA TAGCTCAGCT AACGCTGCAT TTGTCCTAGA
TGGAAGACCG AATCTCGTTG AACCATTAAA TCGCGACCCC GGGTGGGGTC GGATACTGGG
TCTGCTTAGC ATAAGGCTAT TGCATGTAGT AGATTGCAAT CCAACGTGAG TATATTTCAA
TTATCATATC GTCCTCGAGC TTATTATTAT GCCAGCACTG TACATGTTCC TTCTATATTA
TCCGGGCTGG AGGCAATTGC CGACCCTTCC TCTTACACCG GATTCCCAGC ACAGCTGGCC
GACACCGCTC GATATGAATG GCTAGAAGCT ATTCTAAATA ACCAATGGGT CGACAAACTC
GTGTCCATCC TGTCGAAATT GATATCAGCA AGCGTGAGTT GACTCATCTA TCTCCATGTT
GATAAAGACT GATTTTACGA AGTTACCTAA GAAGAAACAT CCGTCCATCT CACCCATCAT
CAGGCTTCTT GCTTCCCCGC TGTCGGCAGC TTCTCCTTCT CAACTCGCTC CCGTCCTCGC
ACCAATGGTC AACCAACTCT TTGCTATTCC CAATCTTCCC TCTTCGTTAC CCTTACAAGC
TTTGACATAT TTATCTGCCA ACTTCCATAT TTTCGACATT GTGATCCCGT TTGCATCACA
AAACCCCCAG ATTTTGACCG AAGGTCGACT GTCGGATGAA CTGGGCAAGA CTTACTTCCT
CGCTAATCTC GTGACATTTG GCATATCTGG CCAGCTGCTT TCTCGGAGCG GTATTCATGG
TGCAGCCGCT TGGATGAGCG TCGTTGGAGC TGTTCTAAGC CAAATGCATG ATGGCTGGGG
GAAATGGATT GAGGGGAGCA CACAAGATGA GGACGTAATC ATGGAGCCAA TCGTGGAAGA
CAGTGATGAT GAGATACCTG ATGACACGGT TGTTATGCCT TCGCGTAAAC CACCCCGTCC
TCGAAGAATC CCGCTTCCCC TGACGATTTG CTCAAAGCTC GTGCTTTTAT CAACTGCGTC
TCACATCTCG ATTTTGACAC AGTATATCCT TTCCCTTCCA AGGGGTGCAC CCGCAACTCT
TCTGATCGAT TTCTCTTCCT TTTTTTTAGG GATGCTGAGC GCTTATCGGG GCAGTCCGAA
GTGGGAGGCT GTATTAGATT CCCTTGTAGA CGGGAAAAGG GGACTGGCGT TGCTGAAAAG
CATCTGGAGA GAAGGTGTAA GAGGCAAATG GGAAGGTACT GAGGATCGTT CTGCTTGGGA
ACAATTCTCA GACAGTGAGT TACAACACGT TCTATAGGAA AGGATATTGA CTAGTGACCC
AGATCCTGTC GCCCCATGCC TCCTTCTGTT GACTCACATG TACTGCCACT ATCTTCTCCT
CACGCCCGAT GATGAATTTT TCTCCCCTGA TCGCAACCCC TTCAACACAG ACGAAGTATT
GCAACTCGCA GCTATCTGGA GGGATCTTGC CTACTGGGGT TACATCAGTG GAGTCTCATC
TCCTGGAGGA GCTCCGAATG GTAAAGGAAG GGACAGGAGA GGGAACGAAG AGGCGAGAGC
ATTGTTTACC AAGGGAGTCA CTCGCGTTGT TGAAAGAAAG TAAGTCTGAT TCTATTTTAT
TCGACGTAGG AAAGGAAGCT CATTTGTGTG CTCGCAGTGC GAGACGACAG TTCGCCAGGT
CCGATTTCTG GGTCATGAAA ACCCAAATGG ACATGCAGGG CTTCGTCGAA GCAGCTGTGT
ATGTTTTGCC ATCAAAGATC GTTCGCGGCT GACGAAGGAT TCATCAGCTA TGAAGATGCT
GAGCTTTCTG GTCTGAACGA TGAAGAAAGA GACGTCACCT CTGATACTTT GCCCCGCTGG
GCTCGGGCGC GGCATAGATA TAGCAAGCGT CAAATGGCAT ACATCTCTCC AAGACTGGGC
CTACTGAACA ACTTACCCAT GGCTGTCCCC TTCGAAACCA GAGTGCAAGT TTTCCAGATG
TTCATCGAGT AAGTGTTGTT CTGCACATTG GAAACTGCTT AACAAGTCGA GTAGGGCGGA
CAAGGCAAAA CTCGGCATCG AATACCACGG TAGAATGTTC AGATCCTCTG CCAAAATCAG
AAGAGACCAT GTAGCCCAGG ACGGGTTTGA CGAACTATCT AACTTGGGTC CAGCCTTGAA
AGGGAGGGTC GATATAACTT TTGTCGATCA GTATGGAATC ACTGAGGCGG GCATAGATGG
CGGTGGGTTG TATAAAGAAT TCTTAACTAT GTAGGTTATC ATTTGTATGG AAAAAGGACA
TTGCTGACGA GTTGAGCCAG TTTGTCGAAG GAAGTGTTTG ACAGCAATCG AGGGCTGTGG
CTGGTGACCG ATCAAAATGA GCTTTATCCA AATCCGCATT CTTATGCGTC TGAGTGTAAG
AAGTACATAA CCATTGAAAA CAGCTATGCT AACACCAAGT CTACTAGCCC ACAATCTGAG
TTGGTATCGA TTTGTGAGTT GCTTTGGTAG TGTGTGAGCA CTTGGACTTA TTAGCTATCT
AGATTGGTCA GGTGTTGGGT AAAGCCATTT ATGACGGGAT ATTGGTCGAT GTCACCTTCG
CTGCATTTTT CTGTGGGTAA TTGCGTTGTC CTGAGGATGA AGTGATCTTA CGATTTGGCG
ATAGTGGCCA AATGGCTCGG AAGACAATCT TATTTAGACG ACCTCGCGTC TTTAGACAAA
GATCTCTACA AGGGCCTTAT TAGTCAGTGT CGATGTCCCC AGCACAGAAC CACATGTTGA
CAGTACACGT GTAGTTTTGA AGAACGATCC TAAGCCGGAG GATATGGCGC TGACATTTTC
CACTACCATT GAGGGTGGGT GTCTACCAGC ACTCACAGAG ACTGTGATGT TAACATCTTG
ACTAGAATTC GGTGTCCAAA GACAGATTGA CCTTGTACCT GGAGGCTCCG ATATACCTGT
CACAGCAGAA AACAGGCATG AATGTGAGCA AAAACATCTA TCGCTTATTG TATACCTGCC
AACAGACAAT GTAGACATTC AACATGTCTG TAAGTACAAG CTAGATAAAC AAATCGCAGC
GCAAAGCAAA GCCTTTTTCA TTGGTCTCTC GGATCTTCTT GATGCAAAAT GTGGGTTCAT
TACCATGTGG TACAATCCAG TGCTCATATA AGCTACAGGG CTGCGAATGT TCGACCAGCA
AGAGCTCCAG CAACTAATCG GAGGCGAAGA GGTCAGTCGC ATTTAATTTC TTCGTTAAAT
TAATGTTGAT GCCTGTCATA TATCCTAGAA ACCTATCGAT CTCAAGGATC TCAAAGCTCA
CTGCAACTTC GATGGGTTTC CGAATGATGT CACCCCAGCC CTTTTTTGGA AGGTGGTTCA
AGGATTCACG GAAGAGCAAA AGAGGGCCCT GTTGCGTTTT GTCACGAGTT GTTCTAGACC
GCCGCTGTGA GTTTTTCATC GGTTTTAAGT CAAATGTACA AGGTGACTGA ACCCGTGGTA
ATCAGACTTG GATTTTCGCA GCTGAACCCT CAATTTGGAG TGCGGTTTAA CGGAGGGGAC
ATGGACAGAT TGCCGTCGGC CTGTAAGTCT CAGAATGAAG AGCAGGTGGT GGACGTGCTA
ATAAATCGTA GCTGCCTGTT TCAATCTTCT GAAATTGCCA GGCTATACTG TACGTTTCGA
ATAAACTTCC GAGCAAGCTT GTTCTCTAAC CTGATCATGC CAGACTGAGG CGACTTTGCG
AGCTAAACTT CTTCAGGCCA TCAACTCCGG AGCGGGATTC GATATGTCGT AATCATTGTT
GATGTTCCAA ATATGTAGGA CCAGATATCT TTTATTCGTT TGTGAGATAT GACATTTGTA
TAGCTTTTGT GTGAGTGGAC TGCGGGCACT CAAGAGTTTC ATGTTTTATG
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| Protein sequence | MFDPAFLLSN SKSNNVNLST STSTSSSDLL SSVRAERLAR EEKRHQELAA IEIQKVWRGR
KVARDFRERI LDDLERSLGI EGGLNVEKGG REMVVLLRDA KNKKDTDRKQ IVSANWCDLG
LQVKDGRPNL VEPLNRDPGW GRILGLLSIR LLHVVDCNPT TVHVPSILSG LEAIADPSSY
TGFPAQLADT ARYEWLEAIL NNQWVDKLVS ILSKLISASL PKKKHPSISP IIRLLASPLS
AASPSQLAPV LAPMVNQLFA IPNLPSSLPL QALTYLSANF HIFDIVIPFA SQNPQILTEG
RLSDELGKTY FLANLVTFGI SGQLLSRSGI HGAAAWMSVV GAVLSQMHDG WGKWIEGSTQ
DEDVIMEPIV EDSDDEIPDD TVVMPSRKPP RPRRIPLPLT ICSKLVLLST ASHISILTQY
ILSLPRGAPA TLLIDFSSFF LGMLSAYRGS PKWEAVLDSL VDGKRGLALL KSIWREGVRG
KWEGTEDRSA WEQFSDNPVA PCLLLLTHMY CHYLLLTPDD EFFSPDRNPF NTDEVLQLAA
IWRDLAYWGY ISGVSSPGGA PNGKGRDRRG NEEARALFTK GVTRVVERNA RRQFARSDFW
VMKTQMDMQG FVEAAVSFAA DEGFISYEDA ELSGLNDEER DVTSDTLPRW ARARHRYSKR
QMAYISPRLG LLNNLPMAVP FETRVQVFQM FIEADKAKLG IEYHGRMFRS SAKIRRDHVA
QDGFDELSNL GPALKGRVDI TFVDQYGITE AGIDGGGLYK EFLTILSKEV FDSNRGLWLV
TDQNELYPNP HSYASESHNL SWYRFIGQVL GKAIYDGILV DVTFAAFFLA KWLGRQSYLD
DLASLDKDLY KGLIILKNDP KPEDMALTFS TTIEEFGVQR QIDLVPGGSD IPVTAENRHE
YIQHVCKYKL DKQIAAQSKA FFIGLSDLLD AKWLRMFDQQ ELQQLIGGEE KPIDLKDLKA
HCNFDGFPND VTPALFWKVV QGFTEEQKRA LLRFVTSCSR PPLLGFSQLN PQFGVRFNGG
DMDRLPSASA CFNLLKLPGY TTEATLRAKL LQAINSGAGF DMS
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