Gene CNA08350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA08350 
Symbol 
ID3253835 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand+ 
Start bp2296614 
End bp2297695 
Gene Length1082 bp 
Protein Length295 aa 
Translation table 
GC content53% 
IMG OID638253156 
Productconserved hypothetical protein 
Protein accessionXP_567074 
Protein GI58259323 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTCA ATATCTGTAT TACCGGCGCT GCGGGTCATG TCGGCAAAGT GGTGTCTCGT 
GCGGCACTTG CCAAGGGGCA TAGGGTGTTC GGCGTCGATC TGCCAGCGAA CTCAGGCGTC 
AGCGGGAACG ATAAGTACAA CTACAAGCAA CTCGATGTGC GGGATGACAC GGCGTTGAAG 
ACTGCGATGA AGGAGCAGGG CTGTGATGCC ATGATACATC TTGCAGCGGT CTTGAACAAC 
CCTAACAGTG TACACAAAGG GAAAGACTGG ACTGAATCGG TGAGTTGCGG AAAGGCGGTT 
AGTACAAGGC ATAGTCGGCT GATCGGGGAG CAATACATTG GTAGGATATT CACAACATCA 
ACACATCAAT GTCATATGGG ATTCTCCGGG CTTCATCTGA CCTTGGGATC AAGCGGGTGG 
TACAAGCGTC CAGTGTGAAT GCTATCGGCA TGCGTTAGTT GTTCCTCTCA TTTGTCGTGT 
CGTCGGCGTA AAGCTAACAG GCCCGTTCGC AGTTGGCTCT AATCCCCCCG CGTTCGACTA 
TTTTCCTTTG GACGAGAACC ATCCTTTCCG CCCACAAGCC GCGTACGATC TCAGCAAGCA 
GTAAGTCCGC TTGCGTCCAT TTGACACTCC GTCTGACCCA CATCTTGATG CTCATGTTCA 
CACCCTTCAG GATCTGCGAA GTGCAAGCAG GCGCCTTTGC TCGAAAATAC CCATGGATGC 
GAATCGCCTC CTTCCGTTAT CATTGGGTCG TTGACTCGTC CTTGTTCAAC CTCGAGACGC 
TGCACAAACG TGGAGGAGAG CCGAAGGATC TGTGGGGCTA CATCTCCGAG AAGGACGTTG 
CTGAGGCGAC TCTGTTGGGA TTGACAGCTC CAGAAGCGAC CTTTCCCAAC GGTCACGAGG 
CCTTCTTCGT CGTAGCGCCG GTACAGCATC AACAGGCTGC TACTATTCCG CTCATCGACA 
AGTGGTATCC TAACGTCGAG AAGAGAAGGG AATGGAAGGG TAACGAGGGA CTGTACGATT 
GTAGCAAGGC CAAACGGCTC TTGGGCTGGG AGGCAAAGGA GTACTTCCCA TGGTACCCTT 
AG
 
Protein sequence
MAFNICITGA AGHVGKVVSR AALAKGHRVF GVDLPANSGV SGNDKYNYKQ LDVRDDTALK 
TAMKEQGCDA MIHLAAVLNN PNSVHKGKDW TESDIHNINT SMSYGILRAS SDLGIKRVVQ 
ASSVNAIGML GSNPPAFDYF PLDENHPFRP QAAYDLSKQI CEVQAGAFAR KYPWMRIASF 
RYHWVVDSSL FNLETLHKRG GEPKDLWGYI SEKDVAEATL LGLTAPEATF PNGHEAFFVV 
APVQHQQAAT IPLIDKWYPN VEKRREWKGN EGLYDCSKAK RLLGWEAKEY FPWYP