| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA08000 |
|---|
| Symbol | |
|---|
| ID | 3253840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | - |
|---|
| Start bp | 2202577 |
|---|
| End bp | 2208753 |
|---|
| Gene Length | 6177 bp |
|---|
| Protein Length | 1507 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638253122 |
|---|
| Product | cadmium ion transporter, putative |
|---|
| Protein accession | XP_567180 |
|---|
| Protein GI | 58259535 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCAG AAGGCAGGCC CTGTTCTGAG TCAAAATATA TCATTTGGAG GAGCTTTGGA
AAGGATGGTA GGTTCCATGG CACCCCAATA AGGATGAATT CGGCTGATGA GTTGTGCAGA
AGGATCGATG TGGCCATCAA TGTACCCCCT CCTTAATCAT GACGATTGAC CAGTCATCTA
ACCCCTCTTT TGCCTAAAAG GAACCTCGAA TTCACTTATC TTATCGGCCG AAGCATCTTA
ATACTGGGAG CAGAGGAAGG ATGCTGAATC CTTTGTCCTA TTCTTCTGAG ACAGAATGGT
TAAGATGCTT AAAGAATCAA AATTGACAAG AAGAGTCCGG GACGTTTTCG TTATCTGATA
GCAGACTCTC GCCAGACTGG TGGTCCCACG ATAAACCGAG ATGATCCCAT TCTACAAGCC
GGTACCTGCA CCATCTGCTA TATTCAAAGA CAGGCCTCTT CCGGAACAGA ATGCCAATTG
CCTATCAAAG ATACTATTTC ACTGGGTGAC TCCTATTATT AAGGCAGGGT ATTCAAGACC
TCTCGAGGCT GATGGCAAGT AAATCATAGC TTCGCTGAAT TGTAAGCTAA TGACTCGCAG
ATTTATGGGA CTTGACAACT GACCTGGAAT GCAAGACGGT AAGTACCCAT TCCGTCTTTC
GTATGAGGGC AACTGACTAT TTCAAAAGGT CTCAGACCAA CTTCGAGCCA ACTTCCTCAG
TCGTACCCCT CCATCCAAAC GTCTTTCACC GTCTCACCCT CCTGTAAACA GCCGTACCTC
TCACATACCC ACTTCTTCCT CGCTCGGAGC TGGTATACAT CCCGCTACCC GACACGGGAG
ATTGAATGAC AGGCTCACAA CGTCAACATC GCGAGCGTAT ATGAAACAAG CTAGGGAGAG
CATGTTTTCC ATGGTTGGTA TGGATGTTTT TGCTATGAAC CATGACACGG CGCACGTCGA
GACCATTACG GATGAAGATA CCCTCCCCAT TCCATCGTTA CGTCAAAAGG AGGAGGGAAA
TCTGAGCGGT CTAGAAAATA AAGGTCTCGT TAAACAATAT GGGAAGAAGA AAGCCAATAA
GATCTTGAAA GGGCAAGTAA CAATAGAAAA CGGTAAATTA TATGACATGA GTCTGATTAG
GGCCATGTAT TCCACCGTGT GGCTGAAATG GTGGATCGCA ATCATTATGA AGAGTTGCGC
TGGTATGTCT CGCTCATGCC GCCCGGTAAA CAGGTACAGA TACTTACCTT CATGCTAGCT
GCTCTTCAGG TGACCTACCC CCTCGTCACC CAACAGCTCA TCAACCAAAT CACCACCGCC
CACACATACC ACAATGACCC CACTAACAAT TCTCCACCTA AATCCATAGG TTACAGCCTT
GGCTTGGCCT TTGCCCTTTT CGCAATGATC CAAGCTTCAA GTTTATTCTC CTATCAGGCT
TTACAGAGAG GAAGTGTGAT TGGACTCATG ATGCGCGCCG CGTTGATTGA CTTAATCGGT
AGCAAGTCAC TGTGAGATCA CCACGGCTTC TTGGTTGTAG CACGTATTAA CGAGCCGATA
GGAAACTCTC GACAACAGCA AAAGTAGAGA TGACCTCAGG TAAAATGACG ACCATGGTCT
CAGCCGACGC TTCCTTTCTC GACTTCTCGG CACCTATGAC TCTTGATCTT GTAGTACAGC
CTGTGCAGAT CGTGGTTGGC TTGGGATTGC TCATCTGGAC TCTCGGATAT TCAGCTTTAG
TCGGACTAGC CGTAAGTCAT CTTCCAACCA TTCATAAGAA ATTATGAGAC TGTCTCAACT
ACCGAAACAT AGGTAATGGC CCTTGCAGGC CCCCTTCAAG CTTTCATGTT CGCTGTCATG
GTTCGTACCC GTCAGTCCCA ACTGACCTAT GTCGATGCGC GCGTTCGTCT GCTATCAGAG
ACTATCACTT CCATCCGAGC AGTCAAACTT TTCGCTTATG TGTCATTCTT TTCCAGCAAG
GTGACTGAGC TGAGGAAGAA GGAATTGGTG TTTCTCAAGA AGAATGGATT CAATAGAGCG
AGTATGAACG CAACGATGGC ATTTATACCC ACCCTTGCTG CTGTTTGTAC GTTGTTCCCC
TTATACGATT TCTTCATTCC TCAAAGCGGA GCTCATACCT TTTTTTTATT GATTAGTAAC
GTTTATCACA TACGGACTCA CAGGTCGTTC TCTCACACCA GCGACTATAT TCTCAGGCCT
GCAGTACTTC AACGTCCTCA AAACGCCCAT TGCCTTCTTG CCTATGTGCT TTACCGCGAT
CTCCGACGCT CTCGTGGGTA TAGGGAGGAT AGGTACGCTG CTGAGAGCAG AGGAGATGCC
AGAAGGGGTC AATGTACAGG AAGATGCTAG GTGGGCGGTA GACGTAAAGG GAGACTTTGA
GTTTCAAAAG GTGAAGGAAA GGAAAAACAA GAATGGGACT ACTGAAGGTG AGGAGAAGAA
CGCTAAGATC GAGGAGAAGC CGTTCAGACT GGCAGACATT GATCTGAGAA TACCTAAGGG
TGACTATGGA TCCAGACAAG GGCTGATCTG GAGCTAACAG ACAAAGCAGG TGCTTTAGTC
TGCATTGTCG GTCGAGTCGG ATCGGGAAAG TCGGCTTTGC TCTCTGGATT AATCAACGAA
ATGAGGCAAA TGGACGGCCA CTCTGTCTTT GGAGGGTCAG TGAGCTACGG TGAGCCTTTA
TGCTTTTTAT CTGGATGGTT GTTGCTGACC TGAGCCCAGT CCCTCAACAA GCTTGGATTC
ATTCAGGTTC AGTCAGAGAT AACATCACTT TCTCTGCCAG ACGGGAAGAG ATTGACTTCG
CCAGGCTGAA CGCTGTGATC GATGCTTGCG CTCTGAGGAC TGATATCCAA GCCATGTCTG
ATGGTGATCT GTGAGTGACA CGTTGTTTCT ACCACAGCCC TTCGGCTAAG TAAAACCAAG
CACCAATGTA GGAGAGAAAG GTCTTCTTCT CTCAGGTGGC CAGCGTCAAC GTCTCTCTCT
CGCCCGTGCA GCTTATGCCC AGTCCTCTAT AGTACTCCTT GATGATCCTC TCTCAGCAGT
TGACGCTCAC GTCGCCCACC ACATATTTGA GAACTGTATT GTTTCTGGTC CTCTCGCGAG
CCGAACCAGA ATTCTCGTGA CTCATCACAT GGCTATTTTA CCAAGGGCTG ATTGGGTTGC
CGTTATGGAA AGTAATAGCC ATGGGATAGG GAGGGTGGCA CAGATGGGAA GGTATGATGA
CTTGAAAAAG CAGCAAGGAC CGTTCAGGAG CCTCTTCGAT GAAGTCGGCT CAGCTGAAAC
ACAACCTCGA GCTCATACAC CGACACCACT TCCTACAACC CCTTCATTCA AACCACCAAC
CTCAGCCCCC AAGGAATCTG AAGAATATGA GAAGAAAACT TCCCAAGATC CTATGGAAGA
GGATCGCCAA ACTGGACCCA TTCCGTGGTC CATCTACGCA ACGTACTTGT CGGCCATGGG
AAACCCGATG TGGTCGCTTC TCTTTGCATC CATGCTCATA TTGACACAGG TGGCAACAGT
GGGGAATAAC TTATTGCTCG GTTTTTGGTC TGCCGATAGC TGGAGTCTTA CTCAGGGAGA
ATATATGGCA GTGTATGCCG GTCTTGGTGT AGGGATTGGT CTTTTTACGG TTAGCCACGT
TTCTTCCAAA CTCAAACGCC TTGCTGACAA GCAAATCAGT TTGGTGCATC CTATACTATG
TTTCTCGCTG GCCTTGGCTC TTCTTACGCT CTCTTTGCAC GAGCATGGGA GCACGTCATG
AGAGCACCAA TGAAATGGCA TGACCAGACT CCCGTAGGTT TTCATCTAAA GGTCAGTTTA
GTCATTGACA AAACTTCAGA GCGGACGAAT CATCAATAGA TTGTCAAAAG GTAGGGGCGC
TTGTATGTTC TGAAAACGGG AGCTTTTCAA GCTAATGGAA CCCAAGATAT TGAGATGCTT
GATGATAGGA TGGCATTCTC ATGGGAGACC CTACTCGTGT AAGACTTACC GCAAATGATC
TGTACATGAT ATCTTACCAT ACGCGTGCTT TAGCAACGGT CTTTCGGCTA TTGGAACCTT
TGGTCTCATC CTTTACTCAT ATCCTTGGCT GGGTTTGGCA TTTATCCCAC TAACGGTCTT
CTATGTAAGT ACTTTTTTGC TTGGTATGAT CACACTGACT GGATCGTTAG TATATTGCCG
GCTCCTACTA CCGACAGACT TCCCGCGAAA TCAAGCGTAT TGACTCCATT ACGAGATCTC
GCATCTATAG CTCTTTCGGA GAACAGGTTT GTTCCATTTT CATAATGTCA ATACAGCCAA
TTGATCGAAA GCTGTAGTTG GCGGGCTCTG CTGTCATACG CGTCTTCGGT AAGCAGTCCG
CTTTTGAGAG AAGAATGCAA GATGCTATCA ATGCTGAGGG AGTGAGTACA TTCGATCAAC
CATCCAGGGT AGTATTAACC TCTTTTGGGG TAACTTAGCG AGCGTATATT CTCACTGTGA
GTTTTTTATG ATCTGATCTA TCACATGGTA ATGACTAAAT TTCCTTACAG CTTGTAATCC
AAAGGTCCGT CAGCCAAATA CACTCAACAA TGTCGACTGA CGAATTAATA CAGGTGGCTA
GGTGTCCGAC TTGATCTGTC ATCAAACCTT CTCATCCTGG TGTGCACCAC TCTGCTTTTA
CTCTAGCCTA GTACTGCTGA TCAGACTTTG TAGCTAATCG CCATTTTCGG TGTTGTTTTT
CGTGACACAG TCAATGCCTC ATCTTTCGGT GTTGTCTTCT CCTATGCACT GTCAGCTGCC
GCTTTGTTCT CAAACCTTGT CTCTCTTTAT GCTCAAGTTG AGATGGAAAT GGTAACTGTT
GTATCATTGT TCGGTGCGGT AATGCTGATG AAATCTTAGA ACAATGCCGA ACGAATAATC
CACTACACCT CCCTTCCCAC TGAACCCCCT GCCATCCTCC CCTCCGACCC AAAGATCTGG
CCTAATCGTG GTTCTGTCAA GTTTAAAGAC TTATCTCTCC GGTACTCTCC TGACACGCCC
TGGATTCTCA AGAGACTGAG CTTCTCTGTG AGTCCGGGAG AAAAGGTCGG CGTGATAGGG
AGGACTGGAG CAGGAAAGAG CAGCCTTGTG GGGGCGATTA TGCGAGCCGT TGGTGATGAA
GAGATAAGAG GTCAGGTGGA AATCGACGGG GTGGATATCA AAAATATTGG GATAGACACG
CTTAGAAATG GAGTTGGACT GATCCCTCAG GAAGCTTTTT TATTTGAAAG TACTGTCCGG
TAAGTGACTA CTTCGTCTGT TGAAGCCTGG CTGATCATCA TTCCAGCGAG AACATGGATC
CAAAAGGACA GAACACCGAT GCTCATTTGA ACTCACTTCT CTCCCTCATC CACTCAGATC
CTATCATGCC ATCTTCACAA CGTCTTCGAG AAAAATTCAA ATTAGATGCC CCCGTCAGCG
ATGGGGGAAG TAACTTCAGT GGGGGCGAAA AACAAATGTG TAAGTCGCTG GAAGTATTTC
TTGGGGGCGG TGAAGGAGCT TATATGAGGT GTAGTGGCAT TGATGAGAGC TTTGGCTCGA
GATACAAAGA TCCTCTTACT AGACGAAGCC ACTTCGTCTG TCGATGGTGA AACTGACGCC
TTGATCCAGA GAATCATCCA AAACCATTTG AAAGGTACCA CAGTGAGTTT TTATGGCATT
CTTCTGTATA TTAGATTGCA TGCAAGTTGA CAACGGATTC AGTTAATCTC AGTTGCTCAC
CGACTCCATA CTTTGGCGTA TTACGACCGG ATACTTGTAT TGGACGGTGG GCGAGTTGTC
GAAGTAGGTT TCACTCATCC GAGACAATGT ATATGACAAC GTTAACTGGT CTCATAGTTT
GATTCGCCTC TGGTATTATT CGACATCCGA GACTCCATCT TTCGCCAGTT ATGCGATCGT
GTTGTACGTC TCCATTGTCC ATTTGCTTCC TGGCCCTTTT ATCTTCTCCA CGCTGACGCT
GCGGATAGAA TATACAAAGG CATGACCTTC TTCGTCTTCG CCACGATGCT TTATACGCCG
CGCAAACTGC AAGAGACCGA GAATCATTGT TCAATCATTG GACGGTTGCG GATGCTTGGG
CTCAGGATGG TATGCGGGCG TCATAATGGT CTCATTCGCC TTAAGCCATT CTCTTAG
|
|---|
| Protein sequence | MMPEGRPCSE SKYIIWRSFG KDGRFHGTPI RMNSADELCR RIDVAINMIP FYKPTVSDQL
RANFLSRTPP SKRLSPSHPP VNSRTSHIPT SSSLGAGIHP ATRHGRLNDR LTTSTSRAYM
KQARESMFSM VGMDVFAMNH DTAHVETITD EDTLPIPSLR QKEEGNLSGL ENKGLVKQYG
KKKANKILKG QVTIENGKLY DMSLIRAMYS TVWLKWWIAI IMKSCAAALQ VTYPLVTQQL
INQITTAHTY HNDPTNNSPP KSIGYSLGLA FALFAMIQAS SLFSYQALQR GSVIGLMMRA
ALIDLIGSKS LKLSTTAKVE MTSGKMTTMV SADASFLDFS APMTLDLVVQ PVQIVVGLGL
LIWTLGYSAL VGLAVMALAG PLQAFMFAVM VRTRQSQLTY VDARVRLLSE TITSIRAVKL
FAYVSFFSSK VTELRKKELV FLKKNGFNRA SMNATMAFIP TLAAVLTFIT YGLTGRSLTP
ATIFSGLQYF NVLKTPIAFL PMCFTAISDA LVGIGRIGTL LRAEEMPEGV NVQEDARWAV
DVKGDFEFQK VKERKNKNGT TEGEEKNAKI EEKPFRLADI DLRIPKGALV CIVGRVGSGK
SALLSGLINE MRQMDGHSVF GGSVSYVPQQ AWIHSGSVRD NITFSARREE IDFARLNAVI
DACALRTDIQ AMSDGDLTNV GEKGLLLSGG QRQRLSLARA AYAQSSIVLL DDPLSAVDAH
VAHHIFENCI VSGPLASRTR ILVTHHMAIL PRADWVAVME SNSHGIGRVA QMGRYDDLKK
QQGPFRSLFD EVGSAETQPR AHTPTPLPTT PSFKPPTSAP KESEEYEKKT SQDPMEEDRQ
TGPIPWSIYA TYLSAMGNPM WSLLFASMLI LTQVATVGNN LLLGFWSADS WSLTQGEYMA
VYAGLGVGIG LFTFGASYTM FLAGLGSSYA LFARAWEHVM RAPMKWHDQT PVGFHLKSGR
IINRLSKGRG AYIEMLDDRM AFSWETLLVN GLSAIGTFGL ILYSYPWLGL AFIPLTVFYY
IAGSYYRQTS REIKRIDSIT RSRIYSSFGE QLAGSAVIRV FGKQSAFERR MQDAINAEGR
AYILTLVIQR WLGVRLDLSS NLLILLIAIF GVVFRDTVNA SSFGVVFSYA LSAAALFSNL
VSLYAQVEME MVTVNNAERI IHYTSLPTEP PAILPSDPKI WPNRGSVKFK DLSLRYSPDT
PWILKRLSFS VSPGEKVGVI GRTGAGKSSL VGAIMRAVGD EEIRGQVEID GVDIKNIGID
TLRNGVGLIP QEAFLFESTV RENMDPKGQN TDAHLNSLLS LIHSDPIMPS SQRLREKFKL
DAPVSDGGSN FSGGEKQMLA LMRALARDTK ILLLDEATSS VDGETDALIQ RIIQNHLKGT
TLISVAHRLH TLAYYDRILV LDGGRVVEFD SPLVLFDIRD SIFRQLCDRV VRLHCPFASW
PFYLLHADAA DRIYKGMTFF VFATMLYTPR KLQETENHCS IIGRLRMLGL RMVCGRHNGL
IRLKPFS
|
|---|
| |