| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA06700 |
|---|
| Symbol | |
|---|
| ID | 3253278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | + |
|---|
| Start bp | 1826593 |
|---|
| End bp | 1828362 |
|---|
| Gene Length | 1770 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638252992 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_566903 |
|---|
| Protein GI | 58258981 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0579] Predicted dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.474421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CACTAATCAG ACATGTCGAT ATCCAGAGCC AAATTATTAC GCCAGGTCTA CCCATTCAAA
CCCCCTTCTA CATCTATCGA TCACCTCGTC ATTGGCGGCG GTGTCATAGG TCTCAGTGTA
GCCGCTGCCC TCGTCAACAA GGGAGGAAAA GATAGGACAA CATTTCTGGT AGAGCGCCAC
GGTCAAGTGA GCTCGTTTCT AACATTCCGT GCATAAATCC TGACCTTCAG TAAGCTTGGA
CAGGAAACGA CGTGAGTTGA TAAGCATCTG CGAGGGCTGA TGAGTAGCGC GAGAAACTCA
GAGGTCATTC ACTCAGGCAT CTAGTAAGTC GCTCCACAAA GGGTTACGGG GCAGAACTAA
AAACGCGCAG CTATCCTTTA GGAAGTATAA AGTCAAGACT ATGCATACAA GGGAGGGACA
TGCTCTACAG ACGGTGTGAG CAATTCGACA TTGGGCATAA ACGTACTGGA AAAGTGCGTT
TCGATCAAAG TACGAACTAT AAACAAAACT AATCTTCATC ATGGAAGATC GTTGTCGCCA
CATCCAACTC CCAAATACCC TATCTTCAAA AGCTTCAAGC ACATTCCATC CACCCCTCAT
TCCTGACAAC TCCCGGCGAC CCTTCCTCTT CACGCATCGC TACTCGATTC CTTTGCGGTA
ACGAGGCTCG AGAGCTTGAG CCTGACCTTT CTCCAAGAGT ATGTGGGGCC TTGCTCATTC
CTTCGACAGG TATCGTGGAT TCACAGGGTC TGGTAGACAG CTTGGAAAGA GAAGTTGAAG
ATCCTGATTA CAATCCTTCG GCATCTCGAG AAGAAGATAG GGGAGAAGGT GTCATCGTAC
TCGGGACGAG AGTTGTTCGA ATTGATCGAG AGGAGTCTGG CAGTGGATGG GTCATACAGA
TGGAGACTGG CTGGGAAGGT CTCGAGGAAG GAGAAAAGGG AGAGGTAGAG AGTGTCCGCG
CGAATGTGGT GGTGAATGCC GCGGGACTTG GATCAGTCAG TCTGTGTGAG GGCGTTGTAT
CCAAAGCTGA GCTGGCAGAA TTATGGCCTG TCAAGGGTAA GTATGCACTG CTATGGAATG
AAGCTAAAAT CAAGGCAATT ATATGTCTTA CAAGGGACCT GGCATTGGCA ATGTCTCAAG
ACTGATTTAC CCTTGTCCAA GCGTCAACGT CGACCACCTG GGTACTCATC TAGCAAGTAC
TCATAGCCTC CACTATTGTT GATTCAGGCT AATGTGTACC CAAGACGCTT GACCTCGACG
GTAACATCAA ATTCGGTCCT GATGTCCAAA CGATTGGAAC TTCTGCTGAT GCCGCTCGGG
ACCCAGATTT TTGGCAGTCG CATCTCGCGC CCGCTTCTTC ACCAGAGCGC ATAGCAGCTT
TTGCTCGCTC AGTCCAGGAC TATCTTCCCA CTATCGACCC CTCCTTACTT TCGCCCGACT
ATGCTGGCAT TCGACCGAAC ATTGCACCGC CCGAAGCTGG GTTCTCAGAC TTTCTCATTC
GCCATGCGGA ACAAAGGAAG GGTTTCATCG AGCTGTTGGG TTTCAATAGC CCGGGGTTGA
CTAGTAGTCT GGCAGTGGGC GAGGTGGTAG GGGAAATGGT AGGCAGACAA GTGTGGAACA
AGAAGGATTA GATTGATATA CGTTTGTGAT AAGCGGTACC ATTCGCGTCG ATACAATCAG
CACACGGTAA CGCTCATACA GCGACAAACT CAGACTCTAT GACTATGTAG AATCGATTAC
CATTTACTAT GGTTTCCGGC ACTTCCTATA
|
|---|
| Protein sequence | MSISRAKLLR QVYPFKPPST SIDHLVIGGG VIGLSVAAAL VNKGGKDRTT FLVERHGQLG
QETTARNSEV IHSGIYYPLG SIKSRLCIQG RDMLYRRCEQ FDIGHKRTGK IVVATSNSQI
PYLQKLQAHS IHPSFLTTPG DPSSSRIATR FLCGNEAREL EPDLSPRVCG ALLIPSTGIV
DSQGLVDSLE REVEDPDYNP SASREEDRGE GVIVLGTRVV RIDREESGSG WVIQMETGWE
GLEEGEKGEV ESVRANVVVN AAGLGSVSLC EGVVSKAELA ELWPVKGNYM SYKGPGIGNV
SRLIYPCPSV NVDHLGTHLT LDLDGNIKFG PDVQTIGTSA DAARDPDFWQ SHLAPASSPE
RIAAFARSVQ DYLPTIDPSL LSPDYAGIRP NIAPPEAGFS DFLIRHAEQR KGFIELLGFN
SPGLTSSLAV GEVVGEMVGR QVWNKKD
|
|---|
| |