Gene CNA04650 details

Gene Information

• Locus tag: CNA04650
• ID: 3253304
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006670
• Strand: +
• Start bp: 1234101
• End bp: 1236272
• Gene Length: 2172 bp
• Protein Length: 377 aa
• GC content: 52%
• IMG OID: 638252785
• Product: actin
• Protein accession: XP_566845
• Protein GI: 58258865
• COG category: [Z] Cytoskeleton
• COG ID: [COG5277] Actin and related proteins

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.479636
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCATCCACAT ACATCCCCTA TACCGCATCC CCACCCACTG CCCAAGGTGA GTCATCTTCC 
CGTCCCCTGC CCCACCCCGC CACTCACCTC TCCACCATCC ACTACTCCGC CGTATTGCAC 
CCACCGCCTA TCGCACATCC GAGCACAAGG GCTGGCCTGC CACGGCTGCT AGGTGGCGCT 
CTCCCACACG CTGATCTCCA TGCTGGCCAT TGGATCATGG GTGCCAGGTG CTGGGTGCTG 
GATATTGGAT GCTGGATGCT GGGTGCGCGC TTGGTCGTTT CCTTCCAGGA TTGACGGTCG 
CCGAGAAAGG ACGACGTGGC GCCTGATAAC GAGGGCCGAC ACCACCGCAT CGCCTCGACC 
TGCATCCATC TCGCCTTGCG CTTTGGGCGC AACAGCCCAT CCTTGTTGGT GCTGTAAGCA 
TGGCTGGAAG AGATGGATGT GCGTTGGACA GAGCTGCCGT CAGGGCTTTT CGGTGCACGG 
ACCCTATTGT CCCCCCCAAT CTTCCCCGCG TATCCTAATA TGCGACCTTT TGCTAATTGT 
CTTTTTCCAT TAGTAAAACT CGCCCAACAT GTCTATGGAA GAAGAAGGTA CGTTCATCTC 
TTACAGCTTC AAATCGGCAT CAGCTAACCT ACTCTTCAGT CGCCGCCTTG GTCATCGACA 
ATGGCTCTGG TATGTGCAAG GCTGGTTTCG CTGGTGACGA CGCTCCCCGA GCTGTCTTCC 
CGTAAGTGAC AACGACATTC CGCGTGAATT GAACTCACCA GATCAGTTCT ATTGTTGGTC 
GCCCTCGACA CCAGGGTGTC ATGGTCGGTA TGGGCCAGAA AGACTCTTAC GTTGGGTAGG 
TGCATCGCCT TTACGCCTTG ATTTCTATTG ACCCACCCCA GTGATGAAGC TCAGTCTAAA 
CGAGGTATTC TTACCTTGAA GTACCCCATT GAGCATGGTA TCGTCACAAA CTGGGACGAC 
ATGGAGAAGA TCTGGCACCA TACCTTCTAC AATGAGCTCC GTGTCGCTCC TGAGGAGCAC 
CCCGTTCTCC TCACTGAGGC TCCCCTTAAC CCCAAGCAGA ACCGAGAGAA GATGACCCAG 
ATCATGTTCG AGACTTTCAA TGCCCCTGCC TTCTACGTCT CTATCCAGGC CGTTCTCTCT 
CTTTACGCTT CCGGCCGAAC CACCGGTATC GTTCTTGACT CTGGTGACGG TGTCACCCAC 
ACTGTCCCCA TCTACGAAGG TTTCTCCCTT CCCCACGCTA TCCTCCGTAT CGACCTTGCT 
GGTCGAGACC TTACCGACTA CCTCGTCAAG ATTCTCATGG AGCGTGGTTA CCTCTTCACC 
ACCTCTGCCG AGCGAGAAAT CGTTCGAGAC ATTAAGGAGA AGCTTTGTTA CGTCGCCCTC 
GACTTTGAGC AGGAACTCCA GACTGCCGCT CAGTCTTCTC AGCTTGAAAA GTCGTACGAG 
CTTCCTGACG GTCAGGTCAT CACCATTGGT AACGAACGAT TCCGATGCCC CGAGGCGCTC 
TTCCAGCCTT CTCTCCTTGG TCTCGAGGCT GCTGGTATCC ATGAGACTAC CTACAACTCT 
ATCATGAAGT GTGACCTCGA CATCAGGAAG GACCTCTACG GTAACATTGT CATGTCTGGT 
GGTACTACCA TGTACAACGG TATTGGTATG TCATTTTATT TTGCCTCCCT CCCCAAAAGC 
GCAGCTAACA CTACTGTAGC CGATCGTATG CAAAAGGAGA TCACCGCCCT TGCTCCTTCT 
TCTATGAAGG TCAAGATTGT CTCTCCTCCC GAGCGAAAGT ACAGTGTCTG GATCGGTGGT 
TCTATCCTTG CCTCTTTGTC TACCTTCCAG CAGATGTGGA GTAAGTATCC ATGTCACGTC 
ACTCTGATAA AACTCCGCTA ACGCTTTGCA CAGTCGCGAA GAGCGAGTAC GACGAGTCTG 
GTCCCTCAAT CGTCCACCGA AAGTGTTTCT AAGTGCCATT AGCATTATCT TCCATTCTCG 
AGAAAGCGTC CTTTCCCTAT TGGCTTTTGT ATACCTGAGC TTGATTGGGT TAGAGAGTTT 
TTGAGCTCTT TAGGTATTTA GTTTAACACG CAAATCAGAC ACTATACTCT TTTTTTCTCT 
CCCTTCCTCA CAATTTGATC TCCCTTTGTC TTAAAAAAAG ATATTTATGA AAGATGAATG 
GATATGCCTT AG 

 

Protein sequence

MSMEEEVAAL VIDNGSGMCK AGFAGDDAPR AVFPSIVGRP RHQGVMVGMG QKDSYVGDEA 
QSKRGILTLK YPIEHGIVTN WDDMEKIWHH TFYNELRVAP EEHPVLLTEA PLNPKQNREK 
MTQIMFETFN APAFYVSIQA VLSLYASGRT TGIVLDSGDG VTHTVPIYEG FSLPHAILRI 
DLAGRDLTDY LVKILMERGY LFTTSAEREI VRDIKEKLCY VALDFEQELQ TAAQSSQLEK 
SYELPDGQVI TIGNERFRCP EALFQPSLLG LEAAGIHETT YNSIMKCDLD IRKDLYGNIV 
MSGGTTMYNG IADRMQKEIT ALAPSSMKVK IVSPPERKYS VWIGGSILAS LSTFQQMWIA 
KSEYDESGPS IVHRKCF