Gene CNA04610 details

Gene Information

• Locus tag: CNA04610
• ID: 3253312
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006670
• Strand: +
• Start bp: 1223202
• End bp: 1225190
• Gene Length: 1989 bp
• Protein Length: 379 aa
• GC content: 48%
• IMG OID: 638252781
• Product: isocitrate dehydrogenase, putative
• Protein accession: XP_566837
• Protein GI: 58258849
• COG category: [C] Energy production and conversion; [E] Amino acid transport and metabolism
• COG ID: [COG0473] Isocitrate/isopropylmalate dehydrogenase
• TIGRFAM ID: [TIGR00175] isocitrate dehydrogenase, NAD-dependent, mitochondrial type

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.673993
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACCAAAAATA CCCATAATTA AATAATGTTC GCCCGATCAG CCTCTAAGAG TGTCGTCTCT 
TCTCTCCGCA CCGTCCAGGT CAGTATTCGT CACACACTTG ACAGCTGCAT GATTAGCGCT 
GTCTATCTGG AAGACGTGTT GTCGAAAGCT GACCTTTGTT TATTTGAAAC TCGCAGGCCC 
CTGTCGGCGT GAGATACTAT GCCTCTGCCT TCAACTCTTC TACTCCCACC TCTGCCTTCG 
CTGGCAAAAA GGGTGCCGAT GTACGTATAT AAGTGCCAGC AACAAGTGGA ACACAAAAGC 
TGACATGGCG ATATGGTGAA TTTGTAGGGC AACTACACCG TCACGCTCAT CCCCGGTGAT 
GGTATTGGCC CTGAAATTGC CAACAGTGTT AAACAAATCT TCAAAGCTGC CCAGGTATGT 
CTCATGACGA TTGTATGTGA GGAACGGAAT TGACGTGTAA CTTTACAGGT TCCCATTGTC 
TGGGAAGAGG TTGACGTGAC TCCTATCCTC AAGGACGGTA AGACCGTCAT CCCTGACGAT 
GCCATCAAGA GTATCAAGAA GAATACCGTT GCTCTTAAGG GTCCTCTTGC TACCCCCAGT 
ATGTTCTTTT CTTTGGTTTT TCAAAGGATA TTGCCGGTGT TGACAGGCTG CGATGAAAAG 
TCGGCAAGGG TCACGTTTCT CTTAACCTCA CACTGCGACG AACCTTCTCT CTCTTCGCCA 
ACGTGCGACC TTGTGTTTCT ATTAAGGGTT ACAAGACTCC TTACGACAAC GTCAATACTG 
TTTTGATAAG GGAGAACACC GAAGGAGAGT ACTCCGGTAT CGAGCACGAA GTGCGTTTAG 
TTCGTTCGAA TTTAGTTTCA TAATGACTCA CAAGGCGCAT AGATCGTCGA TGGTGTCGTT 
CAGTCTATTA AGCTTATCAC CCGAGAGGCC TCTGAGCGTG AGTGGTCTCT TGTTTTCTAG 
TAGTTCTGAA AACGACACTG ATACTGTGTA GGTGTTGCCC GATACGCCTT CCATTACGCT 
TCTGAAAGTG GCAGGAACAA GGTTACTGCC GTCCACAAGG CTAACATCAT GTTGGTGTCA 
TCTCCGTCAA GTAAAAGGTC AAAGAACAGG CTGACAAGAG TACTGATCCG TAGGAAGATG 
TCCGACGGGA TGTTCCTTAC TGCCTGTAGG GATGTTGCCA AGGAGTACCC TAACATTTCT 
TACGACGAGG ATCTCCTCGA CCGAGTTTGC TTGAGGGTAA TTGAGAAAAT TGTCGGTGAA 
TTGACATGAG CTAATTGATC AATAGATTGC TTCCGATCCC TCTCCTTTCG CCGACCGAGT 
TATGGTCATG CCTAACTTGT GCGCTGATTT TAGCATGTGT TAATAATGAT TGCTAATTCC 
TCATAGGTAC GGTGACATTC TTTCTGACTT GTCTGCCGGT CTTATCGGTG GTCTCGGTCT 
TACTCCCTCT GGTAACATCG GCAAGGTCAG TCTTTCACAT GATTATGGGT CGCCTAGCAT 
AGAACTCACT GGCGACAAAT AGGACGCTTC CATCTTCGAG GCTGTTCACG GTTCTGCACC 
CGACATTGAA GGCAAGGGCC TTGCGAACCC CACCGCTCTC CTCCTCTCCT CATTGATGAT 
GCTCCGGTAA GTGACACAGA TCCCTTCCGT CATTGTCCCG GCCCTGTATC CTAGCGTGCC 
TGATCATACA CATCCTTTGG CTCGTAACGT GGCTGACTTG TTTGTCCACA GACACATGAG 
TCTTTACGAG CTCGCCGACA AGATCGAGAA GGCCGCTCTT TCCGTAAGTG GAACTCCCTG 
GCTCTTCCAC ACGTTCGAAA TGCTGATACA AGTATCTTAG ACTATCGCTG AGGGCAAGGC 
TATTACCCGA GACCTCGGTG GTAAGGCCGG CACCAAGGAG TACACTGACG CTATCCTCTC 
CAAGCTTTAA AAAGTTTTGT TTGTAGAGGT TCTAGAGGGA TGAACAAAAA AAATTAAGAA 
CTTTGTTCT 

 

Protein sequence

MFARSASKSV VSSLRTVQAP VGVRYYASAF NSSTPTSAFA GKKGADGNYT VTLIPGDGIG 
PEIANSVKQI FKAAQVPIVW EEVDVTPILK DGKTVIPDDA IKSIKKNTVA LKGPLATPIG 
KGHVSLNLTL RRTFSLFANV RPCVSIKGYK TPYDNVNTVL IRENTEGEYS GIEHEIVDGV 
VQSIKLITRE ASERVARYAF HYASESGRNK VTAVHKANIM KMSDGMFLTA CRDVAKEYPN 
ISYDEDLLDR VCLRIASDPS PFADRVMVMP NLYGDILSDL SAGLIGGLGL TPSGNIGKDA 
SIFEAVHGSA PDIEGKGLAN PTALLLSSLM MLRHMSLYEL ADKIEKAALS TIAEGKAITR 
DLGGKAGTKE YTDAILSKL