| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA04310 |
|---|
| Symbol | |
|---|
| ID | 3253362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | + |
|---|
| Start bp | 1158946 |
|---|
| End bp | 1160458 |
|---|
| Gene Length | 1513 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 638252751 |
|---|
| Product | 3-isopropylmalate dehydrogenase, putative |
|---|
| Protein accession | XP_566782 |
|---|
| Protein GI | 58258739 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AATCATCTCA AGTCATACTT AATAAAATGG CCGACAAGAC GTGGGTGCTC TAAAAATGAA
TGTCAAGGCA TAGCTGACGT CACGCAGCTT TAAGATCACT GTTCTCCCTG GTGACGGTAT
CGGTACGCGC TCCTCACCTG ATTCAAGCCC TTCTCAATGA TGAGTGCTGA TCACCAGATA
GGCCCCGAGG TTGTTGCCGA AGCTGTCCGA GTTCTCGAGA CTATTGTCAA TCATTCTGAT
CTCAAGCTTG ATCTCAAATC ATACGACTTC GGTGGCGCCG CCATTGATAA CCATGGAGTT
CCCCTTCCTG ACGAGACCCT CAAGGCTTGT AAGGAGGCCG ATGCCGTTTT GATGGGTGCG
TGTGACTTCC TAGCAATCAG GATTAAAAGC TAAACAGCAT GAAAAGGTTC CGTCGGTGGT
CCCAAATGGG GTGTTGGTCC TGTCCGTCCC GAGCAGGGTA TCCTCAAGCT CCGAAAGGAG
CTTGGCCTTT ATGCCAACAT CCGTCCCGCC AATTTTGCTT CCGAGAGCTT GCTCAAACGG
TCTCCTTTGA AGGAAGACAC TGCCAGGGGT ACCGACATTA TTGTTCTCCG TGAGCTGATC
GGCGGTATCT GTGAGTATCC GAATGCGCCG AACTTGGAGA GCGGCACCTA CTGACACTTA
AATAGACTTT GGTGAGCGAC AGGAGACCAA TGATGAGGGT GTCGCCTGGG ATCAATGTAT
TTACTCCAAG CCTGAAATTG AACGTATTAC GAGAGTCGCT GCTCAGATCG CTCTGGCTGC
CGAACCTCCT CTCCCCATTA CTTCAGTCGA CAAGGCCAAT GTTCTTGCTA CTTCTCGACT
CTGGCGAAAG ACAGTCTCTG AGCTCATGGC CAAGGAGTAT CCTCAGCTCA AACTTGAGCA
CCAGCTCGTC GATTCTGCCG CCATGATCAT GATCGCCAAC CCCAGGAAGC TTAACGGTGT
CCTCTTAACT GAGAATATGT TTGGTGACAT GTGAGTTTTG TCTATGGTTA CTAAGTATCG
ATGTTGAGTC TGTGTAGTCT TTCTGACGAA AGCTCCGTCA TCCCCGGCTC CCTTGGTCTC
CTCCCTTCTG CGTCTCTCGC CGGTGCCCCC GACGCTAAGT CTACCACCAT GGGTCTCTAT
GAGCCGTACG TCCATTTTTC CTTTTCTTAC ATACCCCAAC TGACCACTCT GCAGTATCCA
CGGTTCCGCT CCTGACATTG CCGGTCAAGG CATCGCCAAT CCCATCGGTA CCATCCTCTC
CGCCGCCATG ATGCTCCGGT ACTCTCTCGG TAAGGGCAGA GAAGCCGCCC TCATCGAACA
GGCTGTGCAG AAGGTTCTTG ACAGTGCCGA ATCCGGCGGT TTCGACTATC GAACGAAGGA
TTTGGGTGGC CAGAGGAGCA CGAAGGAGGT GGGTGATAAA GTTGTCGAGG TGTTGAAGGG
TCTTTTGGGT GCTTAAAGTA GCAGGCGGCG AGTTCTGCAC TAACGATAGC ATATGCATAT
AACTATGAAT CTG
|
|---|
| Protein sequence | MADKTFKITV LPGDGIGPEV VAEAVRVLET IVNHSDLKLD LKSYDFGGAA IDNHGVPLPD
ETLKACKEAD AVLMGSVGGP KWGVGPVRPE QGILKLRKEL GLYANIRPAN FASESLLKRS
PLKEDTARGT DIIVLRELIG GIYFGERQET NDEGVAWDQC IYSKPEIERI TRVAAQIALA
AEPPLPITSV DKANVLATSR LWRKTVSELM AKEYPQLKLE HQLVDSAAMI MIANPRKLNG
VLLTENMFGD ILSDESSVIP GSLGLLPSAS LAGAPDAKST TMGLYEPIHG SAPDIAGQGI
ANPIGTILSA AMMLRYSLGK GREAALIEQA VQKVLDSAES GGFDYRTKDL GGQRSTKEVG
DKVVEVLKGL LGA
|
|---|
| |