Gene CNA04140 details

Gene Information

• Locus tag: CNA04140
• ID: 3253369
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006670
• Strand: -
• Start bp: 1110685
• End bp: 1112818
• Gene Length: 2134 bp
• Protein Length: 610 aa
• GC content: 54%
• IMG OID: 638252734
• Product: tRNA dihydrouridine synthase, putative
• Protein accession: XP_566775
• Protein GI: 58258725
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0042] tRNA-dihydrouridine synthase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.663253
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGTCGGTCCC AACCAGCGCC CATATAGGCG TACATATACG AGCAGCCTTA CGCCCCAATA 
TCAACTGTAC AGCTCGCGGA AACGGTTATT TCCGGAACAA CATGTCTGTA GCTGCTCAAG 
TCGTCAGCAG CGAGGGGCCA CAGAGTGTGG GGGACGAGTT ACAGACAAAG AAGCAGTTTC 
CTACTTTTCC AGCCCCGGGA AAACCGACGC ATGAAAAGCT GGGCGGATAT GATTTCTACA 
GATCGATCGG TAGTCCGAAA TTTGTGGTGG CTCCTATGGT TGACCAAAGC GAGCTTGTAC 
GTCGTCATTT TGATTGAAAA TGCACTGGCT CAAAACGTGG GGGGCTGACG CGCTATTTAC 
CAGGCCTGGC GTCTTCTCTC ACGGTCTCCT CTTCCTCCAG CTCTGGCCGG CCCATCTGAG 
ACAGTGACGA CGCCGCAAGG CAAGGCATAT ATCCGCCACC CCGGTGGTGC CCACGTCTGC 
TATACGCCAA TGATTCACGC AAAAGTGTTT GTGGATGCAA AAGGAGAAGG CGGACGTAAC 
GGAGATGGTC AATTTTGTCT GAGCCTAGAT GAAGAAGGCG GGGAGGGGAC TATTGGAGGG 
GTGGAGGGGG GTGACAGGCC TCTCATTGTG CAGTTTTGTG CCAATGATCC CGATATTTTG 
CTGGCAGCTG CGAAGAAGGT GGAGCATAGG TGTGATGCGG TGGATATCAA CTTGTACGGG 
CAACTTCATT GGCTGTATAG GATGCTTTTT TAGCTAACAA GGGAAAATCT AGTGGATGTC 
CCCAGGGCAT TGCCAAACGA GGTCACTATG GCTCTTTCCT CCAAGACGAA TGGGAGCTTA 
TACATAAACT CAGTAAGTCG CTTTTATTTT ATTTTTCAGC GTCTCCAGTC TCTGATCCTT 
GCTAGTCTCT ACACTTCACG AGAACCTGTC TGTCCCTGTG ACTGCAAAGT TCCGCATCTT 
CCCCGACCTC GACAAGACGA TCGCATATGC TCGTATGATG GAAGCCGCCG GCGCTCAAAT 
CCTTACTTGT CACGGCCGTA CTCGGGAGAT GAAGGGCCAG AACACTGGTC TTGCCGATTG 
GGAATATATC CGCGAGGTGA AGAAAGCTGT CAAGGTGCCT GTTTTCGCGA ATGGAAACAT 
ACTGTACAGG GAAGACGTGG ACCGGTGTAT GGAGGTGACA GGTTGCGATG GGGTGATGAC 
TGCAGAAGGC AACTTGTCCA ACCCTGCTAT TTTTATGCCG CCCGAACACC CTCACGCCCA 
TCCGCCTATA ACGGTGCTCG CCCACCGATA CCTCGATATT GTGGAAGCGC TTGATACGCC 
TACCGCAGGA AGCGCTATCA AGGCGCATCT TTTCCGACTT CTCAAACCTG TGCTCGACAC 
GGACGAGGAG CTACGGGTGC AGATTGCTAC CTGCCGATGG TCTGACGGTA TGGACGGTTT 
CCGTGAGATT ATCAGAGATA TTGAAAGACG GTGTGCACCT GTTCGTGAAG CTCTCGGAGC 
TGATTGGAGA CCGCCCACTG TTGATCCCAA GACGGGCTAT CGATCCCTCC CGATGTTTGC 
CGCTCAGCCC CAGATCCGTG CGAAACCCGT GTCGACCGAG ATTGGAGGTC ATGAAGATAT 
GGTATCGCGT CCCGTATCCC CCGGGAAAGA GGGTGAAGGC CGTATGTTTG ACACGCCCAA 
TATCACCACT GCGCCGGCGT CTTCCGTCCC CGGTACCGTC CTCTTTTCCC GATCACACCG 
CCACACCAGC TTAGGCCAGA CGGAGCGTTG CGTCCATTCG GACTGTACGG GTGTTGCGGC 
TACGCGATGT CCTACACGGG CATGTATTAC GCATTGCAGG ATATTGCGTG CGGTGGAAGC 
TGGGTATACG AGGGAAGAGG CTGAAGCGGA GGGTGCAAAG GGCGGGCTGG TTGGGATGGG 
CTGTGATGCG CATGAGGAGA AAGTGAGGGC GAGGAAGGAG AGGGAGGCGA GGAAGCGCAA 
GGGGAGAGAG ATGGCAAAGG AAAAGGCAAA GGAGAGGAAG AAGGAGGAAA AGGCAAAGGA 
GGAGAGAGAG AAGAGCAAGG AAAAGGTGGG GATGACGGAG GAGGAAGTAT CGTTTGCAGC 
CGGGTTGGCG TAGGTTGTGT AGCATGGTTT CTTT 

 

Protein sequence

MSVAAQVVSS EGPQSVGDEL QTKKQFPTFP APGKPTHEKL GGYDFYRSIG SPKFVVAPMV 
DQSELAWRLL SRSPLPPALA GPSETVTTPQ GKAYIRHPGG AHVCYTPMIH AKVFVDAKGE 
GGRNGDGQFC LSLDEEGGEG TIGGVEGGDR PLIVQFCAND PDILLAAAKK VEHRCDAVDI 
NFGCPQGIAK RGHYGSFLQD EWELIHKLIS TLHENLSVPV TAKFRIFPDL DKTIAYARMM 
EAAGAQILTC HGRTREMKGQ NTGLADWEYI REVKKAVKVP VFANGNILYR EDVDRCMEVT 
GCDGVMTAEG NLSNPAIFMP PEHPHAHPPI TVLAHRYLDI VEALDTPTAG SAIKAHLFRL 
LKPVLDTDEE LRVQIATCRW SDGMDGFREI IRDIERRCAP VREALGADWR PPTVDPKTGY 
RSLPMFAAQP QIRAKPVSTE IGGHEDMVSR PVSPGKEGEG RMFDTPNITT APASSVPGTV 
LFSRSHRHTS LGQTERCVHS DCTGVAATRC PTRACITHCR ILRAVEAGYT REEAEAEGAK 
GGLVGMGCDA HEEKVRARKE REARKRKGRE MAKEKAKERK KEEKAKEERE KSKEKVGMTE 
EEVSFAAGLA