| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA02240 |
|---|
| Symbol | |
|---|
| ID | 3253630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | + |
|---|
| Start bp | 584479 |
|---|
| End bp | 585804 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638252556 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_566612 |
|---|
| Protein GI | 58258399 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0042] tRNA-dihydrouridine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.12016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTGG ATCAAGATGC TACCGACGAA CAGCTGTATG CCGACCTTCC GTCTCCACTA
CATCTTTCCC CCTCCGAACT TATTGAAACA TATCACCCGA ACGTCCTGGC ACCTCTAGTG
CGCTGCTCTA AACTTCCTTT CCGCCATCTT ACTTCTCTGT ACGAAACCCA CATCACTCAC
ACACCCATGA TCCTAGCTGA AGAGTTTTCG CGCGCTCAGA TAGCGAGGAC TTCAGATTTC
AGCACAAGTA GCAACGAAAG AGGCGTCTAC TGGATGGCTC CCAATAATGG AAAATGCCGA
GGGAAAGGGG AGTATATAAC CCGCGTTGGC CATCCAGAGG ACGTCCGACC TGCGAAAGAG
CCGTGGAAAA CGTATCACTC TCCTCCATCT ACCGAGCGCC TCCCCCCATC GCCGGCTCCC
CCCAACCCCC AAGCGCAGCT CGTTCGAGGT TGCTTAATAG CCCAGTTTGC ATCTCCCAAT
GCCAAATCTC TGGCTGACGC CGCTGAACTT ATTTCTCCTT ATGTTGACGG AATTGATCTG
AACTGCGGCT GTCCTCAAAG ATGGGCTTAC AACGAGGGTA TTGGATGCGC CTTGTTGAGG
AAACCGGAAT TAGTACGAGA TATGGTTAGA GGCGTTAAAG ATCGAATGGG GTGGGGGTGG
CCAGTCAGCA TCAAAATCAG GATCGACTCA GAACAGGAGT AGGTTAACAT AATGTGAAGG
TCATTTTCCT TTTACTCACA GTCCTCAGAA AGACGGAGCA ATTGATCTCA AATGCCCTTC
AAGCAGGAAT ATCTCATTTA ACGATCCACG GCCGAACGAG GCACCAGCCT TCGACTGATC
CGGTTAACCT TCCTGGAATC AAGTTTGCAG TAGATTGCGT TAAAGGCGAA GTCCCATGCG
TGGCGAATGG AGACGTCTGG GAACTTGAAG ACGCAAGGCA GATGAGACTT CACACAGGGG
TTCAAGGTGT GATGGCTGCC AGAGGGTTGT TGGCCAAGTG AGTTGGCTTT TTTGATGCTA
TTATATGTAT CTCACTATCG TGCAAACAGT CCTGCCCTAT TCGCCGGTTA TGATAAAACG
CCAGAGGATT GTGTATCTCA ATTTATCAAC CTTGGCTTGG ATTATGGTTT CAACTTTTCT
CTTTTCCACC GTCATCTCGC ATACATGCTC GAATCCCATC TTTCCCGAGT AGAAAAAGTC
TGGTTCAATT CTCTCACATC GCAAGCATCT GCAATAGAAT GGCTGAATGA AAGAGCTATC
AATTTCAAGG AAAAAAGAGG GACTATCTGG GATGCGCGTC GAGGCTACAA CATTACTGAT
GTATAA
|
|---|
| Protein sequence | MALDQDATDE QLYADLPSPL HLSPSELIET YHPNVLAPLV RCSKLPFRHL TSLYETHITH
TPMILAEEFS RAQIARTSDF STSSNERGVY WMAPNNGKCR GKGEYITRVG HPEDVRPAKE
PWKTYHSPPS TERLPPSPAP PNPQAQLVRG CLIAQFASPN AKSLADAAEL ISPYVDGIDL
NCGCPQRWAY NEGIGCALLR KPELVRDMVR GVKDRMGWGW PVSIKIRIDS EQEKTEQLIS
NALQAGISHL TIHGRTRHQP STDPVNLPGI KFAVDCVKGE VPCVANGDVW ELEDARQMRL
HTGVQGVMAA RGLLANPALF AGYDKTPEDC VSQFINLGLD YGFNFSLFHR HLAYMLESHL
SRVEKVWFNS LTSQASAIEW LNERAINFKE KRGTIWDARR GYNITDV
|
|---|
| |