| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA00640 |
|---|
| Symbol | |
|---|
| ID | 3253742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | + |
|---|
| Start bp | 183976 |
|---|
| End bp | 186688 |
|---|
| Gene Length | 2713 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638252397 |
|---|
| Product | integral to plasma membrane protein, putative |
|---|
| Protein accession | XP_567082 |
|---|
| Protein GI | 58259339 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTAAACCTGT GCTGCACTGT TATTATCTGC AAACATCTTT TTTTATCCCT TTGCATCAGT
AACCCGCCTT TCTGTAAAAT GAGCGCCCAA GAATTCTACC AAGGCGGGAA TCAACGTGGG
TATCAGCAAC AACAATTCCC TCCTCCCCCT GGCGGTCCAC CTCAAGACCA AAACGGGGGC
AAGCAGGAGT ATGTTCCTCC CCAGGGCCAA CCGCCCAATT ACAACATGAA ACCCTCTCAG
CCTTATGCCT CTACCAACCC CGAAACGGGT GGACAGCCCG TATATCAAGA CACTGCGCCG
TTCTCCCAAG CAAATGAAAA AACGGGAGAG AGGATGAACC CTCGAAAGAG GGTGAACGAT
ATCATTCCGC TGATATTGTT TATCGCCGCC GTTGTTGGGT TTGCAGTTGT TTCCGGTATT
GCGATACATG GTTTCGTGCA GGTCAATGGT TTGGGAGGTG GAATGGGTGA CTCTAGTATA
GGGCGTACAG GTTCCAGTAT AACGCTCGAC TAGTAGGTTC CTTTTTCTAT CAGGTCCAAA
TCGAAACTTC CTTTTAACAT AATGCAGCCA CACGGTCTAC CTTCTTCTCG TTGTCGTTGC
CCTCGGTTTG GTCATTGCAT CTTTATATCT TGCGGTGAGT TACCCTCGCC GTAGTCTATG
CAACAACACG GCTCATTCGA TAATTCACAG GCCTTGAGGG CGTTCACCAA GATCATTCTT
GAAGTCACTC TAGCATTGAC GGTCATTCTT AATATTGGTA TTTGTATTTG TGAGCTACAA
ATATATCATG GGATGTGAGA GTAAGATGCT AATGGATCAT AACCCAAGAC TATTTTATCA
TCCAGTGTAT GTGTACTGCC GTGATCTTAC GTTTAATGGC CCGACTAACT TTCATAATAG
ACTGGTCTGG CGCTATCATC TTCCTTATCA TTGCCCTTGT TTCAGTCTTC TTCTACTGGG
GCATGCGAAA GCGGTAAGTC CAGTGGGACT GTAGCTGTGA AATCCGAGAG CTCACATTTT
GTCGGCCACT CAGTATCCCT CTGGCCAAAT TGCTTCTTCA AACCACAATT GACGTTACAA
AGCACCACCC CTCGGTATAC GTTGTTGTCT TCATCGGCCT CATCATCCAA GCAGCTGTAT
CAGTTTGGTA CACTTTCACC TGTATTGCCA TTTATGTTAA GTGGACTCCG GGAAGTGCTG
GTACGTCCGT CCGATCCCAT GAAGTAAGGC TGAGTGGCTA AATGGATTAG CTTGCTCGGA
TGGGGGTTGT TCCTCTAGCA AGGTAGCAGG TCTGGTATTC TACGCCACTT TTTCCTACCT
CTGGCTGTCT CAGGTCATCG GCAACGTCAT TCTATGTACT CTCGCTGGTG GTGTCTTTGG
AGGCAAGTCG TCTTTTCCTT GCTGCGTTCG AAACTTTATT AAACCTAGAT TGTACAGGAT
GGTATTACTA CGGCCCTCGA ACCCCTGGTG GAGGTGTGCC AAAGAGAGCA AGCTTGTTGG
CTTTCGTGCG AGCTTCGACT CTTTCCCTTG GATCAATCGC TTTTGGAAGT CTGTTGGTTA
CTATCCTTGA GCTTTTGAGA TTGATATTGC AACTGTTCAG ACAGTATGAA GCTGGACAAG
GTGACAGTAT GTTCTCTTTC CCTGCGTTGA CTTTCATCTT GTGCGACTCG CGCTGACTAG
ATTTCAGTGA TTGGATCTAT CCTCATATGC ATTGCTCAAT GCTGTATCGG CTGTATTCAA
TGGATGGTCG AGTATTTCAA TAAATGTACG TTCCCCCCTC CCAACCCCAT ATATATAAAA
GTGCGGTTAC TGATGATGAC CTCTACAGAT GCCTAGTGAG ATTTCATCGT GTCCTTAGAT
CGTGCGATTA TCTGCTAACC TGAACCTATT CTTCATCTCA CAGTATTGAG ATTGGTGAGC
CTCTTTTCGA TACACGTGCT TATCGATTTA CATGTGACTG ATCGCGAATC TTAGCTCTTT
ATGGCAAGTC ATACATCCCT GCTGCCAAGG ATACCTGGAG ACTTCTGAAG GACCGCGGTA
TCGACGCTTT GGTGAATGAC TCTCTCGTTG GTACCGGTAA GTGAAACCCA AGCCCTTTGC
TACGAGGAAC TTATCAGCTA ACTTATTTGG CGGAAAGCTC TCATGTGGGG CGCTTACATC
AACGGTTTCC TATGCGCTGT ACTGGGCTAC TTCTACCTCA GATGTAAGTG GCGATGCGAC
GATGCTACAG GGCAAAGACG CTGCTTACCA TCTATGTAGT CACTCACCCT GCGTACAACT
CTGATGGGCA ATACTCCGCG TGAGTGCTAC CGCTGCAGAA TACGGATCCG CCGCTGACCT
GCTCATTTCC GTGATAGACC TGTGATTCTC TTCTCATTCC TCATCGGTCT TAACGAGAGT
TTCACCGTTG GCAGCGCTAT CGTTCGTGGT TCTCGTATAT CTCCCATGAG ACTCTTCAGC
TGACAAATAA TTTCAGGATG CTGGTGTATC TACCATCTTT GTCGGCTTGG GAGAAGACCC
TATGGTGCTT GCCGAGAGGA GTCCAGGGCT GTTTGAGATG ATCCGCCAGG TTTATCCCCG
TGTCGTCCAG GGTGTCCCCC ATTAGTTTGT TACTTTATAA TTCTTAGACA GGTCTTGTTC
CAAATGTTAC GAGCCCTAGA TCTGTTATAC ACGTCAATGA TATTATAATG TATACGTCCT
TGAGACGTTA TAG
|
|---|
| Protein sequence | MSAQEFYQGG NQRGYQQQQF PPPPGGPPQD QNGGKQEYVP PQGQPPNYNM KPSQPYASTN
PETGGQPVYQ DTAPFSQANE KTGERMNPRK RVNDIIPLIL FIAAVVGFAV VSGIAIHGFV
QVNGLGGGMG DSSIGRTGSS ITLDYHTVYL LLVVVALGLV IASLYLAALR AFTKIILEVT
LALTVILNIG ICIYYFIIQY WSGAIIFLII ALVSVFFYWG MRKRIPLAKL LLQTTIDVTK
HHPSVYVVVF IGLIIQAAVS VWYTFTCIAI YVKWTPGSAA CSDGGCSSSK VAGLVFYATF
SYLWLSQVIG NVILCTLAGG VFGGWYYYGP RTPGGGVPKR ASLLAFVRAS TLSLGSIAFG
SLLVTILELL RLILQLFRQY EAGQGDMIGS ILICIAQCCI GCIQWMVEYF NKYAYIEIAL
YGKSYIPAAK DTWRLLKDRG IDALVNDSLV GTALMWGAYI NGFLCAVLGY FYLRFTHPAY
NSDGQYSAPV ILFSFLIGLN ESFTVGSAID AGVSTIFVGL GEDPMVLAER SPGLFEMIRQ
VYPRVVQGVP H
|
|---|
| |