Gene lpl2603 details

Gene Information

• Locus tag: lpl2603
• Symbol: dotB
• ID: 3114737
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Lens
• Kingdom: Bacteria
• Replicon accession: NC_006369
• Strand: +
• Start bp: 2969519
• End bp: 2970652
• Gene Length: 1134 bp
• Protein Length: 377 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637584375
• Product: defect in organelle trafficking protein DotB (ATPase)
• Protein accession: YP_127931
• Protein GI: 54295516
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT
• TIGRFAM ID: [TIGR02524] Dot/Icm secretion system ATPase DotB

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTATGG ATAATATTAA TTTAATGCCC GATGAGCCAA CTCGTTTCAC TCCAGTATTC 
ATGGACAGAA TGCTGGAGCA TGCAGAAAGC CTGAATGCTT CAGATATAAC AATCCAAACT 
GGCGAACCCA TTTTTGCAGA GGTTTATGGA AGACTCCTTA AAATTACAAA TCGACGTCTT 
TCCAATACAG AATTGGGCGA CCTTATAAAT TCCATTTATG GCCCGAATGC CACGACACAA 
TTACTTTCCG GTAAAGATAT AGATACTCAT TATGAGTTTC GGCCCAACCG TGGTGTACGC 
TATCGATATA GGGTTAACGC GACTGCCTGC CTGGTAGAAG GTCATGATGC CATTCAGATC 
ACATTAAGAA CTATTCCGAC CACACCACCC AAACTCAGTA CCATGAACCT CCCTGATAAC 
ATTATTGAAG CGATTGCTCC ACAGGAAGGA ATCGTGTTTA TCACAGGCGC TACCGGTTCG 
GGCAAATCGA CATTGTTGGC GTCCATTATT CGAGAGCTTA TTGAAACATC AGACTCAAAC 
CGCAAAGTAT TAACTTACGA ATCCCCAATA GAATTCGTCT ATGATGAAAT TGAAACAATT 
TCCGCTGTAG TAAGCCAATC AGAGATTCCA AGACACTTAC CCAACTTTGC TGATGGAGTA 
AGAAACGCAT TAAGACGAAA GCCGAGATTA ATTATGGTGG GTGAATGTCG TGATGCAGAA 
ACCATCAGTG CTGCTCTTGA AGCTGCTTTA ACAGGACACC CGGTCTACAC AACCCTGCAT 
ACTTCTGGTG TTGCAGAAAC GATGCGACGT CTGGTCACGT CTTTTAGCGG GGAAGAGCGT 
TTGGGAAGAA CCATCGATAT TCTTGAAACA ATTAGGCTTT GCATTTGGCA AAAACTGGTC 
CCAACCGTTG ATGAAAGACG TGTAGCCCTA AGGGAGTATC TGGTATTCGA TGAAGAAGTG 
AGAGATATTC TATTGGAGGG AGACCCTAAC GAAGTGACTT CAGCCACTCG TAAGTTAGTG 
AGGCAAAAAG GGCAGTTAAT GACTTGGGAC GCAAAAATGA AATTTGAACA GGGGATTATC 
AGTGAGCGAG TTTATAAATT AATCATTGCT GGGGCCAAAG AATATCAACA ATAA 

 

Protein sequence

MSMDNINLMP DEPTRFTPVF MDRMLEHAES LNASDITIQT GEPIFAEVYG RLLKITNRRL 
SNTELGDLIN SIYGPNATTQ LLSGKDIDTH YEFRPNRGVR YRYRVNATAC LVEGHDAIQI 
TLRTIPTTPP KLSTMNLPDN IIEAIAPQEG IVFITGATGS GKSTLLASII RELIETSDSN 
RKVLTYESPI EFVYDEIETI SAVVSQSEIP RHLPNFADGV RNALRRKPRL IMVGECRDAE 
TISAALEAAL TGHPVYTTLH TSGVAETMRR LVTSFSGEER LGRTIDILET IRLCIWQKLV 
PTVDERRVAL REYLVFDEEV RDILLEGDPN EVTSATRKLV RQKGQLMTWD AKMKFEQGII 
SERVYKLIIA GAKEYQQ