Gene lpl1312 details

Gene Information

• Locus tag: lpl1312
• Symbol: lspH
• ID: 3113920
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Lens
• Kingdom: Bacteria
• Replicon accession: NC_006369
• Strand: -
• Start bp: 1468411
• End bp: 1468896
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637583085
• Product: type II secretory pathway protein LspH
• Protein accession: YP_126662
• Protein GI: 54294247
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4970] Tfp pilus assembly protein FimT
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACTC ATAAGGGTTT TACCCTGATA GAAATTCTTA TTGTCATAGT GATTATAGGT 
ATAACCTTGG GGTTTGCCTT AATCGCTTTT GGTGATTTCG GGGAAAGCAG ACGTATACAA 
TTTTCAGCTG AACAATTGGC AAATACCCTA AGCCTGGCTC AACAACAAGC CATTTTAGAA 
AGCAGTACCC TTGGGTTAAA AATAGATAAT AGCAGTTACC AAATTCTTAA GTTTCAGGAC 
CAGGCGGGAT GGAATCCCAT ATCGAACAAA GGAATTTTTA AACTCTACTA TTTTCCCAAA 
AACGTTGTGA TTAGCCTTAA AACAAATCTA AAACATAGCC GGGGGAACCC TGCAATCATA 
ATAGCGCCAT CTGGTGACAT GACCCCTTTT ACTATAGAAT TTGGCACAGA TAAGGAAAAA 
TGGATAGCCA AACTTACAGG CAGCCATAAT GGTGATTTGG ATTTTACCAT GACAAAATCT 
CAATGA 

 

Protein sequence

MTTHKGFTLI EILIVIVIIG ITLGFALIAF GDFGESRRIQ FSAEQLANTL SLAQQQAILE 
SSTLGLKIDN SSYQILKFQD QAGWNPISNK GIFKLYYFPK NVVISLKTNL KHSRGNPAII 
IAPSGDMTPF TIEFGTDKEK WIAKLTGSHN GDLDFTMTKS Q