Gene lpp0411 details

Gene Information

• Locus tag: lpp0411
• Symbol: rpsE
• ID: 3117212
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: +
• Start bp: 463898
• End bp: 464414
• Gene Length: 517 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637579109
• Product: 30S ribosomal protein S5
• Protein accession: YP_122751
• Protein GI: 54296382
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGGAACGATT ATGTCATTCG ATGAATTACC CAAGTCAGAT GGATACCAAG AAAAGTTGGT 
ATCGGTAACT CGTACGGCTA AAGTTGTAAA GGGTGGGCGA GTTTTTGGTT TTGCTGTTTT 
AGTAGTTGTA GGTGACGGAA AGGGTAAAGT AGGTTTTGGA CGAGGTAAGG CAAGAGAGGT 
TCCAATAGCA ATTCAAAAAG CTATGGACCA AGCCAAGAAA AATATGGTTT ACATTCCTCT 
TTCAGGCACT ACAATATTCC ACGAAATCAC ATGGAACTAC GGAGCTTCCA AGGTGTTTAT 
GAAGCCAGCA AGTGAAGGTA CAGGAATTAT TGCTGGGGGC GCTATGCGTG CCGTTTTGGA 
AGTGTTGGGT GTGCAAAATA TTCTTGCAAA AAGCATTGGT TCTACCAATC CAAGTAACAT 
TGTTCGTGCC ACTATTGGTG CATTGACACA CATTGGTACG CCGGACTATG TAGCAGCCAA 
ACGTGGAAAA ACAGTTGAAG AAGTAATGGC AGGCTAA 

 

Protein sequence

MSFDELPKSD GYQEKLVSVT RTAKVVKGGR VFGFAVLVVV GDGKGKVGFG RGKAREVPIA 
IQKAMDQAKK NMVYIPLSGT TIFHEITWNY GASKVFMKPA SEGTGIIAGG AMRAVLEVLG 
VQNILAKSIG STNPSNIVRA TIGALTHIGT PDYVAAKRGK TVEEVMAG