Gene plpl0016 details

Gene Information

• Locus tag: plpl0016
• ID: 3115700
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Lens
• Kingdom: Bacteria
• Replicon accession: NC_006366
• Strand: +
• Start bp: 13940
• End bp: 14509
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637578660
• Product: hypothetical protein
• Protein accession: YP_122310
• Protein GI: 54292923
• TIGRFAM ID: [TIGR02761] type IV conjugative transfer system protein TraE

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.813355
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTTTA AAAGTTATCA AAGCCGCTTA AGTCAGCTGT CAGCACGGTT TAATCTGATG 
GTTGTTTTAG TATTTGGCCT TTTGATATCG AACGTTTTGC TGTCTTGCTT TTTATTTAAA 
GCATGGAATC AACATACGAT TGAGGTCACT CCTTTTAGTG GTGCGCCTTC TTATTTGAAA 
TCAGCTTCCA GTGTTGATGG CCACTATTTA AGCCTGATGG CAGAAAACTT TGTTAATGAA 
CGTTTAAGCG TCACACCAGA AACGGTAGAT GCCAGCCATC AACGCCTTCT TTCTTATGTT 
GGGCATCAAA ACTACAACCA AATGCTACGG CTACTAACTA ATGAGGCCAA GGTCATCAAA 
GATAAAAAAA TGTCGTCCAT TTTTTATATT GATAAAAATA AAGCCAACCC ACACGAACTG 
ACTGTCGTTG TTTCAGGGAT TTTGAAGCGG TTTGTAGGGC TTCAAGCATT AAATGACGAG 
CGTAAAACTT ATGTTTTGCA GTTCCAATAC AAAGACAGCC GTCTATCCAT AGTTCAGTTT 
GCGCCTTTAA AGGAGAAACA AGATGCATAA 

 

Protein sequence

MDFKSYQSRL SQLSARFNLM VVLVFGLLIS NVLLSCFLFK AWNQHTIEVT PFSGAPSYLK 
SASSVDGHYL SLMAENFVNE RLSVTPETVD ASHQRLLSYV GHQNYNQMLR LLTNEAKVIK 
DKKMSSIFYI DKNKANPHEL TVVVSGILKR FVGLQALNDE RKTYVLQFQY KDSRLSIVQF 
APLKEKQDA