Gene BMAA1602 details

Gene Information

• Locus tag: BMAA1602
• ID: 3087159
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006349
• Strand: -
• Start bp: 1739119
• End bp: 1740918
• Gene Length: 1800 bp
• Protein Length: 599 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637565486
• Product: type II/III secretion system protein
• Protein accession: YP_106182
• Protein GI: 53716218
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1450] Type II secretory pathway, component PulD
• TIGRFAM ID: [TIGR02516] type III secretion outer membrane pore, YscC/HrcC family

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0044992
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGCCA AGATTCCCGT TTTGCTGTCC CTGCTGTGCT CGCTCGCGAG CCTTTCCGTC 
GACGCCGCGC CGATCCGCTG GCGCAGCGCC GACATCCAGT ACGCGGCCGA GGGCAAGGAC 
GTGAAGGACG TGCTGCGCGA TCTCGCCGCG AGCCAGAACA TCGCGGCGAA CGTCGCGCCC 
GGCGTGAGCG GCGCGGTGAG CGGCAAGATG AAGATGTCGC CGCAGCGCTT TCTCGACACG 
CTCGCCGCGT CGTTCGGCTT TGTCTGGTAT TACGACGGCA CCGTGCTGTA CGTGACGCCC 
GCGAGCGACA TGAAGAGCAC GCTCGTCAAG CTCGATCACG CGAACACGGG CGACCTGCGC 
GACCTGCTCG AGCAGATGAA GGTCGCCGAT TCGCGCTATC CGATCACCTA CAACGCGCAG 
CAGCGCACCG CGCTCGTCGC GGGGCCGGCG CGCTACGTCG AGCTCGTGAC GAGCGTCGCC 
GCGCGGCTCG ACGAGAATTC CGCGCGCACG GGCGGCACGC AGATCCGCGT GTTCTCGCTG 
AAGCACGCAT GGGCCGCGGA TCGCGACGTG AACGTCGACG GCACGGCGGT ATCGATGCCG 
GGCGTGGCTT CGCTGCTGAA CCGGATGTAT CACCCGGGCG AAGGCAAGCG CGCATCGCAG 
ACGACGCTCG GCAAGCCGAT CAGCCGCGCC GCGCCGATGA CGGATCTCGG CGGCGGGCGC 
AGCGGCGTGC CGCCGCTGCC GCCGTACATG CAGGCCGCGC AGTCGGGCGA CGGCGCGGCC 
ATGCCGGCGG GCGTGCCCGG CGTGCCCGGC GGCGATCCGC GCCCGAGCGG CATGGTCGCC 
GCCGCGATCG CGAATCCGGG CGCGGCGCGC GCGCCGGGCG GCGGGATGCC CGATGCGAAC 
GGCGTGCCCG CCGGCGCGGG CGACGCGGCG GATCTGCCGG TGATCCAGGC CGATCCGCGC 
ACGAACTCGA TCCTCGTGCG CGACGTGCCC GAGCACATGG CGCAGTATCC GGACCTGATC 
GCGCTCCTCG ACGTGAAGCC GCGCCTGATC GAGATCGAGG CGCGCATCAT CGAGATCGAC 
GAAGGCGCGC TCAAGCAGCT CGGCGTCGAC TGGCGCGCGC ACAACAGCCA TTTCGACCTG 
CAGACGGGCA CGGGGCTCAC GTCGCAGAAC GGCTATGCGA ACGGCACGCT GAACCCCACG 
TTCGGCTCGA TCACGCTCTC CGGCAACGAT TCGGTCGGCG TGCCGGCGAG CCCGCTCGGG 
CTGTCGCTGA CGGCTGTGCT CGGCGACGCC GGCCGCTATC TGCTCGCGCG GATCAACGCG 
CTCGAATCGT CGAACCAGGC GCGCACCGAC GCGAGCCCGA AGGTCACGAC GCTCGACAAC 
GTCGAGGCGG TGATGGACAA CAAGAAGCAG TTCTTCGTGC GCGTGGCGGG CTACACGTCG 
GCCGACCTGT ACAGCATCTC GACGGGCGTG TCGCTGCGCG TGCTGCCGAT GGTCGTCGAC 
GAAGGCGGGT GCACGCAGAT CAAGCTCGAC GTGCGGATCG TCGACGGCGA GCTGTCGCAG 
CAGACGGTCG ACAACATTCC GGTGATCGTG TCGAACGAGA TCAACACGCA GGCGTTCATC 
GAGCAGGGGC AGGCGTTGCT GATTGCGGGC TACAAGGTGG ATGCGCGCTC GAGCACGCAA 
TCGGGGGTGC CGGTGCTGTC GAAGCTGCCG CTCGTCGGCG CGCTGTTTCG TTCGACCGAC 
AAGCAGAACA GCCACAGCGA GCGGCTCTTT CTCGTGACGC CGAGAGTGAT CGAGCCTTGA 

 

Protein sequence

MKAKIPVLLS LLCSLASLSV DAAPIRWRSA DIQYAAEGKD VKDVLRDLAA SQNIAANVAP 
GVSGAVSGKM KMSPQRFLDT LAASFGFVWY YDGTVLYVTP ASDMKSTLVK LDHANTGDLR 
DLLEQMKVAD SRYPITYNAQ QRTALVAGPA RYVELVTSVA ARLDENSART GGTQIRVFSL 
KHAWAADRDV NVDGTAVSMP GVASLLNRMY HPGEGKRASQ TTLGKPISRA APMTDLGGGR 
SGVPPLPPYM QAAQSGDGAA MPAGVPGVPG GDPRPSGMVA AAIANPGAAR APGGGMPDAN 
GVPAGAGDAA DLPVIQADPR TNSILVRDVP EHMAQYPDLI ALLDVKPRLI EIEARIIEID 
EGALKQLGVD WRAHNSHFDL QTGTGLTSQN GYANGTLNPT FGSITLSGND SVGVPASPLG 
LSLTAVLGDA GRYLLARINA LESSNQARTD ASPKVTTLDN VEAVMDNKKQ FFVRVAGYTS 
ADLYSISTGV SLRVLPMVVD EGGCTQIKLD VRIVDGELSQ QTVDNIPVIV SNEINTQAFI 
EQGQALLIAG YKVDARSSTQ SGVPVLSKLP LVGALFRSTD KQNSHSERLF LVTPRVIEP