Gene BMAA1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1517 
Symbol 
ID3087917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand- 
Start bp1646532 
End bp1647593 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content71% 
IMG OID637565402 
ProductAraC family transcriptional regulator 
Protein accessionYP_106108 
Protein GI53716492 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000450911 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACATG CGTTCCGCAC GGATTCTCGC CCAACGCGCT TCCCGTCGCA CCATTCACCG 
CCCCTCACCA TGGCGAAGAT GCACGCGCCC CGCGGCGGCA CGCTGCTGCA ATTCTTTTCG 
ACCGACGACA TGCCGCTCGC GCGCGCGGCG GCGTTCTGGA GCGCGCACGT GTTCCAGTGC 
GAGGACGTGC GCGCGTCGTC CGCGCGCGCG TTTCACGGGC ACGGCTTTCT CTGCCGCTGC 
GAGCGCGGCC GGTTCGTTCG CTTTCGCGGC GCGTCGCTCG ACACGCGCAT CGGCGCGGCG 
TGGCTGAGCG CCGCGCCAGC CGATGCGTAC GTGACGATCT GCGCGCTGCA TGCGGGCGAG 
TGCACGGTCG AAGCGCCCGG CTTGCCGGAT GTGCGCTTTC GTGCGAACGA GCTGTTCATG 
CTGGACGGCG GTCAGCCGAT GCGCGTGCGC TGGAGCGAGC CGTGTTTCAG CGCGCTCAGG 
CTGCCGCGCG CATCGGTGGG GCGTACGCTC GGCCAGGCGG CGATGGACGC GTCGCCGAGC 
GCGGCTTCGT TGCAGGAGGC GCGGCTCGCG CCGTTTCTCG CGGCGGAGCT CGCGCTGATC 
GGCGGTCGCG GCCCGACGCT GTCGTCGGAC GAGCTCGATT ACATGCTCGC GCGCGCAGCC 
GAGCTCGGCC GCACGCTGCT TCAGGCGGCG CTGTCGTCGC GCGCGCGGCG CGGCGCGCCC 
GCGCGCGCCG ACCGGCTGCA GGCCGCGTAT CGCTACATCG AGCAGCATCT TCATCTGCCG 
ACGCTCACAC CCGAGCGGAT CGCCGACGCG ATCCATTGCT CGCGCACGCA GCTCTATCGG 
CTGTTCCGCC ATGAATCGCA GACGGTGAAG GCGGCGCTGC GCGAGGCGCG GCTGAACCGC 
AGCCTCGGCT ATCTCGAGCA GCCCGAGGTT ACGCTCAGCA TCGGCGAGAT CGCGCATGCT 
TGCGGTTTTC CCGATCAGTC GACGTTCGGC AAGCTGTTTC GCCGGCGCTT CGGCAGAACG 
CCCGGCGAGG TGCGCCGCGC CGCGCGGGGA TGTTCGATAT GA
 
Protein sequence
MPHAFRTDSR PTRFPSHHSP PLTMAKMHAP RGGTLLQFFS TDDMPLARAA AFWSAHVFQC 
EDVRASSARA FHGHGFLCRC ERGRFVRFRG ASLDTRIGAA WLSAAPADAY VTICALHAGE 
CTVEAPGLPD VRFRANELFM LDGGQPMRVR WSEPCFSALR LPRASVGRTL GQAAMDASPS 
AASLQEARLA PFLAAELALI GGRGPTLSSD ELDYMLARAA ELGRTLLQAA LSSRARRGAP 
ARADRLQAAY RYIEQHLHLP TLTPERIADA IHCSRTQLYR LFRHESQTVK AALREARLNR 
SLGYLEQPEV TLSIGEIAHA CGFPDQSTFG KLFRRRFGRT PGEVRRAARG CSI