| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMAA0601 |
|---|
| Symbol | codB |
|---|
| ID | 3086414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006349 |
|---|
| Strand | + |
|---|
| Start bp | 609732 |
|---|
| End bp | 610994 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637564518 |
|---|
| Product | cytosine permease |
|---|
| Protein accession | YP_105361 |
|---|
| Protein GI | 53717294 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1457] Purine-cytosine permease and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACAC GGGGCGAATT TTCATTGAGC GAGGTGCCCG CGCACGAGCG CAAAGGCGCA
CTGTCGATCA CGATGGTGCT GCTCACCTTC ACGTTCTTCA CGGGTACGAT GTTCGCGGGC
GGCAAGATCG GCGTCGCGTT TCGCGTCGTC GACATGCTGT GGGTCGCGGT CGTCCGCAAT
CTGCTGCTTG CCGCCTATGC GGCCGCGCTC GCGTTCGTCG CGTCGCGCAG CGGGCTCAAT
TCGGTGCTGA TGGGGCGTTT CTGTTTCGGC GAGGTCGGCA GCAAGCTGTC CGATTTCCTG
CTCGGCTTCG CCGAACTCGG CTGGTATGCG TGGGGCACCG CGACGGTGGC GATCGTGCTC
GTCAAGCTGC TCGGCTGGCC CGCGTCGGTG ACGACGCCGC TGATGGTGCT GTTCGGGTTC
GGCTTCTCGA TTACCGCGAT CGTCGGCTAT CGCGGGATGG ACGCGCTCTC GCGCGTGTCG
GTGCCGCTGA TGTTCGCGCT GCTCGTCGTG TCGATGTGGA TCGCCACGCG CGACGTCGGC
GGCTGGCCGG GCCTCGCGAA GATCGCGCCG ACGCAGCCGA TGAGCTTCGC CGCCGCGGTC
ACGATGGTGT TCGGCACGTT CGCGAGCGGC GCGACGCAGG CGACGAACTG GACGCGGCTC
GCGAAGAGCG GCCGCGCGGC CGTCGCGGCG AGCATGATCG GCTTTTTCGT CGGCAATGGG
CTGATGATCG TCGCGGGCGC GTATTGCGCG ATCGTCTATC AGCAGTCCGA CATCGTCGAA
GTGATGATGC TGCAAGGGCT GTCGATCGCG GCCGTCGTGA TGCTCTGCCT GAACCTGTGG
ACGATTCAGG GGCCGACGAT CTACAACGTG TCGGCGGCCG CGTGCCATCT GTTGCGCAGC
GAACGCCGCC GCACGCTGAC GCTCGTCGGC GCGGCGGTCG GCATCGTGCT CGCGATCGGC
GGCATGTACG AGATGCTGAT CCCGTTCCTG ATCCTGCTCG GCTCGATCAT TCCGCCCGTC
GGCGGCGTGA TTCTCGCCGA TTTCTGGTAT CGGCACCGCG GCCGCTATCC GGCGATCGCG
AGCGCCCGGC TGCCGCGCTT CAATATCGCC GGGCTCGCCG CATATGCGAT CGGCGCGGCG
CTCGCGTACG CATCGCCGTG GATCGCGCCG CTCGTCGGCA TCGCCGCGTC GTCGTTCTGC
TACATCGTGT TCGTGCAGAT CGCGGGCCGC GCGGTGCGCG CGCCGTCGGT CCAGGGAGAG
TGA
|
|---|
| Protein sequence | MATRGEFSLS EVPAHERKGA LSITMVLLTF TFFTGTMFAG GKIGVAFRVV DMLWVAVVRN
LLLAAYAAAL AFVASRSGLN SVLMGRFCFG EVGSKLSDFL LGFAELGWYA WGTATVAIVL
VKLLGWPASV TTPLMVLFGF GFSITAIVGY RGMDALSRVS VPLMFALLVV SMWIATRDVG
GWPGLAKIAP TQPMSFAAAV TMVFGTFASG ATQATNWTRL AKSGRAAVAA SMIGFFVGNG
LMIVAGAYCA IVYQQSDIVE VMMLQGLSIA AVVMLCLNLW TIQGPTIYNV SAAACHLLRS
ERRRTLTLVG AAVGIVLAIG GMYEMLIPFL ILLGSIIPPV GGVILADFWY RHRGRYPAIA
SARLPRFNIA GLAAYAIGAA LAYASPWIAP LVGIAASSFC YIVFVQIAGR AVRAPSVQGE
|
|---|
| |