Gene BMAA0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA0002 
Symbol 
ID3087625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp2420 
End bp3463 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content64% 
IMG OID637563939 
Productphage integrase family protein 
Protein accessionYP_104859 
Protein GI53716038 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTGC CCATTCTGAC GAGTCCCCCT TCGCCGCCCG ATATCCCGAG CGATCTGTTC 
GATCGCGATA CGTCGGACTG GCTCAACCAT CCGGACACCG CATTCGATGC GTGGCTGGCC
GCCCAGGAAT TTCGCCGGTC GTCAGCTGAC GTCTACCGCG CGCAATGGGG TGCGTTTCTC
GGCTGGCTCG CGAAACGGCA AAAGAACCTC GCGACGGTCG ACACCGAGAC GATCGCCCTT
TTCGTCGGCG AGCTGCCGAT CAAGAAGACG CAGCGAGTCC GCTACTTGAG GCTGATCGAG
CGCGTGCTCG ATCACGTGCG CAAGAACGAA TTCGGTTCGA CGAATCCTGC CCGTTTCATT
GCTCAGGACG GCGAAGCAAC TTGGCGCACC GCGCGCGACA ACGAGCCGAC GAGCTTTCTC
GCACCGGCCG AACGCGCCGC GCTGCTTGCC TATCTGTTCT CCCCACTGCC CGCGGCAGGC
GCGGCGCTCT GGAAGGAACG CCGCGATCGC GCGCTGATTG CCGCGTTCCT CGGCGGCGGA
CTGAAGACGG GCGAGGCGCG AGCGCTTACG ATTAGTTGCG TCAAACTCGG ATCGACCATG
CTGACGATTC CGGCGGCTCA GCCGGAATTC ACGCGCGAAA CGCATCTCGC GTCGTTCGCG
ATCGCGCTGT TCGACGCGTG GCTCGCCGAG CGTCAGCGCT GCGGCATTCC GGGCGAGCTT
GTCTTTCCCG CCTCGCAATC CGGGCGGCCG ATGCACAAGG CGACGATGCT GCGCGCGGTC
GATGCGATCG TCGACGCGGC CGACATCGCG CAATCGCGCA CCGCACGCGC CAGCCCGCAG
ACGTTGCGCA ACACGTTCGC GGCCGAACTG TTCGAAAACG GCGTCGAGCC GGAGAAAGTC
GGTCAGTGGC TGGGGTTCGC CCAGCCGATT TCGTCGAATC GTCTGCATCG GGCCTGGAAG
AATTGGCGGG AAAGCCTCGC CAGTGCGCTA CCCAATGCCG AATCGCTCAC CGATGAAATA
TCGACCGAGC CAAGCCGGGC TTGA
 
Protein sequence
MSLPILTSPP SPPDIPSDLF DRDTSDWLNH PDTAFDAWLA AQEFRRSSAD VYRAQWGAFL 
GWLAKRQKNL ATVDTETIAL FVGELPIKKT QRVRYLRLIE RVLDHVRKNE FGSTNPARFI
AQDGEATWRT ARDNEPTSFL APAERAALLA YLFSPLPAAG AALWKERRDR ALIAAFLGGG
LKTGEARALT ISCVKLGSTM LTIPAAQPEF TRETHLASFA IALFDAWLAE RQRCGIPGEL
VFPASQSGRP MHKATMLRAV DAIVDAADIA QSRTARASPQ TLRNTFAAEL FENGVEPEKV
GQWLGFAQPI SSNRLHRAWK NWRESLASAL PNAESLTDEI STEPSRA