Gene PSPTOA0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTOA0035 
Symbol 
ID1187325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004633 
Strand+ 
Start bp37434 
End bp38135 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content52% 
IMG OID637408368 
ProductGntR family transcriptional regulator 
Protein accessionNP_808693 
Protein GI29171509 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value0.840145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAGCT TTCCACGTCC TCACTCCCTC GTCGAAGGTG TCGTCTCTGC GATCCGCAGA 
GAGATTGTGA GTGGACGGCT CCCTGCAGAG TCGAAGATGC CGACAGAGCA TGAGTTAGCT 
GATCAATTCA GTGTGAGCCG GTCCGTGGTA CGTGAGGCCA TTTCGCAGCT GAAAGCTGAC 
GGCGTTCTAG TTATTCGTCG TGGCAGCGGT TCATTTGTTT CTCAGACTCC TGGTGGAACG 
GTCTTCCGGC TGCCAGGCAA CGAGGACCAT TCGGCTGGCT TAGCTAAACT ATTTGAATTG 
CGCTCATGGA TTGAAATACA AGTTGCGTCT GTTGCTGCGC AGCGGCATAC AGATGCAGAT 
TTGAAGCGGC TGTCTGACGC CATGTTGTTG ATGGAGAGTA ACGCGGGAAA TTTCGAGATA 
TCCTCCAAGG CAGATTGTGA ATTTCACTGC GCCATCGTAG CTGCGTGCAA AAACGAATAT 
CTGACTGCCT TCCATGACTT CTTAGGCAGC CAGTTAATCC AGGCTCGTTT CATGGCTTGG 
GAAAACTCCT CAAAACTTGA AATAGGTCCA AGTGGTGCCA TCCGTGAACA CCGTGAAATC 
TTCGACGCAA TAGCAAAACG AAATCCCTCT GAAGCCGCTC ATTGTGCCCG CATGCATCTC 
AAGGCTGCCG CGCTACGGCT CAATATCGAT CTGGCGGATT AG
 
Protein sequence
MLSFPRPHSL VEGVVSAIRR EIVSGRLPAE SKMPTEHELA DQFSVSRSVV REAISQLKAD 
GVLVIRRGSG SFVSQTPGGT VFRLPGNEDH SAGLAKLFEL RSWIEIQVAS VAAQRHTDAD 
LKRLSDAMLL MESNAGNFEI SSKADCEFHC AIVAACKNEY LTAFHDFLGS QLIQARFMAW 
ENSSKLEIGP SGAIREHREI FDAIAKRNPS EAAHCARMHL KAAALRLNID LAD