Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTOA0009 |
Symbol | |
ID | 1187316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004633 |
Strand | - |
Start bp | 9357 |
End bp | 10484 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637408344 |
Product | ParaA family ATPase |
Protein accession | NP_808669 |
Protein GI | 29171485 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1192] ATPases involved in chromosome partitioning |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTCCTG CCGATAACGA AATAGCTGAA CAGCAGAATT TTGTAGACTT CAACTCCATT CTTTATACGC CTCAGTACGC CGCTGGCTGC TTCGGTCTGA CTACGCGTCG ACTTATGGCC ATTGAAGAAG AACACGGCTT GGACATCAAA CGCATAAAGC GTGGGTCGTC TACATCCAGG GTCTACACGG CCTCGGATCT TTTCAACATC GCCGCGCTGC GTCGGTCGCT AGGCCATCTC AAACCAATTG GTCGTCAAAT TGTCGCTTCA ACCTTCGTGC CAAAGGGCGG GACTGCCAAG ACCACTACCG CGGTCAACCT TGCTATTAGC GCTCAATTTG CAGGGATTAA GACACTAATT ATCGATAATG ACCCTCAGGG TGATACCTCA AACATGCTGG GTTATGACCC CGACCTCAGC CCAGATGATC TCGTCGACAT GAACATTCCT TCAGATCGGC TGGTGGATGG ACATTTTGGC AATCTTCTCA GCCCGTTGCT TCGAATGAAG CCTTTTTCAG AAAAGGTGCT CGCTGATGTG ATCAAAAAAC CTTTTGGCGA AAACGGCATT CATCTCATCC CGGCTGACAC ATATCTTGAG GATTTGGCTG TTGCGCTCGA TGCTTCGAAC AATTCGGATA TGTGGTATGC CCGATTCATC GAAGACGCAA ATGCAGGAAA AGTACCAGGA TGTGACCTTT CTGTTTATGA CCTGATAATT ATTGACAACG CGCCTGCTGG CTCTCGATTG ACCAAGAATT CAGTTGCAGC TAGCGATCTA TTGTTGTGCC CCGTTCGGAT GGACAAATTT TCGTTCAGAG CACTGTTAAG GTTGCATGAG TGGTGCGCTC GATTCGCAAA AGAGTACAGC TATGCGCCTG CTCTCATGGC TATTCCTACG ATGTTTATTC GCAAGCGCGC TAGGTTGTTA GCAAATCTTC AATCACTCAA CACGCTTTTC CCTGGGCAGG TAACTGAGGA AAAAATCTAT TTTTCCGAAG ATTATTCGAA GTCACTGGAT GATGGTATTC CTCTCATGTT GTGGAAGAGG GCGAACTCAC AAACCATCGA CACTGCAAGG CTTGTCTTTG GTGAAATCTT GCAGAAGATT CGCAGCTTGG CCGCCTGA
|
Protein sequence | MTPADNEIAE QQNFVDFNSI LYTPQYAAGC FGLTTRRLMA IEEEHGLDIK RIKRGSSTSR VYTASDLFNI AALRRSLGHL KPIGRQIVAS TFVPKGGTAK TTTAVNLAIS AQFAGIKTLI IDNDPQGDTS NMLGYDPDLS PDDLVDMNIP SDRLVDGHFG NLLSPLLRMK PFSEKVLADV IKKPFGENGI HLIPADTYLE DLAVALDASN NSDMWYARFI EDANAGKVPG CDLSVYDLII IDNAPAGSRL TKNSVAASDL LLCPVRMDKF SFRALLRLHE WCARFAKEYS YAPALMAIPT MFIRKRARLL ANLQSLNTLF PGQVTEEKIY FSEDYSKSLD DGIPLMLWKR ANSQTIDTAR LVFGEILQKI RSLAA
|
| |