Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_B0007 |
Symbol | |
ID | 1187385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004632 |
Strand | + |
Start bp | 7588 |
End bp | 8028 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637408272 |
Product | PilM protein, putative |
Protein accession | NP_808598 |
Protein GI | 29171552 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 0.390397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACATTT ACTGGCTTGC AATGGTGGTC ATAACGGCAG TGCTTGGGAT GGTTTATGAG AAGACCCATC AGGCAGAACA GAACTCTCAG ACCGTGGAAA TATCGCTGAT TGCTCGTAAC GTCCTGGTCT ACAGAAATGC CTTGGCCGAG TATGCATACA CTCACAAAGC TGCGTCAGGA ACGGTGGCCG ATAACCAGTT GGATCTGCCC ACCTGGTACG CGCGTTACCC TGGAGTGGAT GGAGTGATCG ATGCAGGACG AAGTTACGCG TTCTACGGCT CCCCGCAGCC TAGTCTTGTT TCGGAGATGA TCAATTTGAC TGGGGGGTCG CTGGCCATCT GCACCGCATC ATCCGGTCGC TTACTTACAC TAAGCTCAGG CTACGTTGGT GTCACGCTGC CTGCGGCAGT TCCAACTGGA GCAGCTGTCG CCTACCAATG A
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Protein sequence | MNIYWLAMVV ITAVLGMVYE KTHQAEQNSQ TVEISLIARN VLVYRNALAE YAYTHKAASG TVADNQLDLP TWYARYPGVD GVIDAGRSYA FYGSPQPSLV SEMINLTGGS LAICTASSGR LLTLSSGYVG VTLPAAVPTG AAVAYQ
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