Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5630 |
Symbol | |
ID | 5666584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 191660 |
End bp | 192508 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_001504339 |
Protein GI | 158146061 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAT TCGCAGACAC TCCCGACTGG GATGACGTAG AGCGAACACT AAAAGATACT TTTGATACCG TCAACCAAAG TTTTGATCGT GGATGGACGT CTACTCAAGA TGAATGGCAC GGCTTCACTA GGAGAATAAG TCTTCGCGTT ACGTCTATTT TTGGCGATAT GGGCCCAGAC AGAATCGATG CAGTTAAAGA AGCTCTGCGC CTATCTTATC CCATTATATT AACAAGATTG AGCCGGCGGT GGGCATCAAT AGAGATCGAC CAAATAATTA ACATCTTACT TCAAGTTGCG AAAGAAGTAA CGATGATCGT AGGTGGCAGC GTACTGGCTG GCAGCATTAT AGGTGGCTCC ATCGGAGCTT TAGCGTATGG AACGGGAATA GGTGCAGGAG TTGTTATAGG CGGAGGTATT GGCTTTCAGC TTGGCAACGT TATTCTCATG GCCTTAGGAC TCTCCGCAAT TGCTGATTAT TTTTATGAGG GGCTGCCCGC CTGCTTGGCA ACGCTGCATG ACGGCCTAGC ACTAGCATGG AACGCAGAGT ATGGCACGCC TGTCGGTTTA GATCCAACTG GCGGCTCTGC CGCTCGCAGA GACTCTAGGA TTGACGAGGC CTCTAGACTA CTAGCGAACG GGCAAGAGCA GCTTATTACT CTTCTCCTAA CCGCTATCGT TACTTATGTA ATGCGAGGGC AAATAAAAAA TAGCTTACAG AGCTCTGCCG ATGACATTAT GGCTCGTAGC GCTCAACTTC AGGCAGAGAT ATCAAACAAG CAACTGGCTG ACTGGTTAGC AAAAAATATA GAGAAATTAT TAAAGGAAAC TCTGAAAAAG GTTTCCTGA
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Protein sequence | MRIFADTPDW DDVERTLKDT FDTVNQSFDR GWTSTQDEWH GFTRRISLRV TSIFGDMGPD RIDAVKEALR LSYPIILTRL SRRWASIEID QIINILLQVA KEVTMIVGGS VLAGSIIGGS IGALAYGTGI GAGVVIGGGI GFQLGNVILM ALGLSAIADY FYEGLPACLA TLHDGLALAW NAEYGTPVGL DPTGGSAARR DSRIDEASRL LANGQEQLIT LLLTAIVTYV MRGQIKNSLQ SSADDIMARS AQLQAEISNK QLADWLAKNI EKLLKETLKK VS
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