Gene PSPTO_5578 details

Gene Information

• Locus tag: PSPTO_5578
• ID: 1187270
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 6356934
• End bp: 6357614
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637396893
• Product: hypothetical protein
• Protein accession: NP_795298
• Protein GI: 28872679
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.992022
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGGCC CAGTCAAACT CAAGTTTTCT GAAAAATACG ATCAGGATCA TGCAGAGCAG 
TATTTCCAGA AGCACCATGC CACTCTGGCC CGTCGCATGT CCCACTTGCG GGATGAGCAA 
ATGGTGCGTA AAGCGCTCAA GCTAGCTGGA GACCCAGGCC TGGTATTGGA TTTACCCTGT 
GGCGCAGGCA GGTTCTGGCC TCTCCTGTCA GAAAAGAAAA GTCGAATAAT CATAGGTGCA 
GACAACTCAG CAGACATGCT AAGCACTGCC TGTACGCTAC AGGATCAGGA CATTGTCAAA 
CGGGTAAAAC CATTACAGAC GTCAGCATTC AATATTTCGC TGCCCAACAA TTCAGTTGAT 
ACCATTTTCA GCATGCGCTT GCTCCACCAC ATTGGTGAGG CAGAAAACCG CATGACGATG 
CTCAGAGAGT TTCACCGCGT TACCCGTGAG ACTGTCATCC TTTCGCTGTG GGTGGATGGC 
AACTACAAAT CCTGGAGGCG CACACGCCAG GAGGCTGCTC GCAGGGCATC GGGTAGGCAA 
GGTGATTACC AAAATCGGTT TGTCCTGCAT CGCGCAACCG CAGAGGCGGA ATTTCTTTCG 
GCTGGGTTCG CTATCGAAGA ACGTATTGAC TTCATACCGC TCTACGCAAT GTGGCGGGTC 
TATCTTTTGA GAAAGCTGTA G 

 

Protein sequence

MSGPVKLKFS EKYDQDHAEQ YFQKHHATLA RRMSHLRDEQ MVRKALKLAG DPGLVLDLPC 
GAGRFWPLLS EKKSRIIIGA DNSADMLSTA CTLQDQDIVK RVKPLQTSAF NISLPNNSVD 
TIFSMRLLHH IGEAENRMTM LREFHRVTRE TVILSLWVDG NYKSWRRTRQ EAARRASGRQ 
GDYQNRFVLH RATAEAEFLS AGFAIEERID FIPLYAMWRV YLLRKL