| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5566 |
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| Symbol | |
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| ID | 1187258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6342781 |
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| End bp | 6344472 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637396885 |
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| Product | transposition protein, TnsD-related protein |
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| Protein accession | NP_795290 |
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| Protein GI | 28872671 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACC TTCTATTCTT CCCTATCTCT ATGCCTGGCG AGACGCTACA TTCCCGTATC
ACTCGCTACC ACTTCCTTTC AGGCAATAAA ACTGCGGGTG AGACCTTCCG CGACCTGTTC
GGCTCGGCCA CTTTCTCAGT AGGCATGTTG CCGAAGCAGA TTGAGGTGCT TGCAACCAGG
CTGCCCGGAG ACACTGAGAG CAATCTCGAC GAACTGATCT TTACGAACAC CACGTTCCCT
CTTTACAGAC CTTTTCTGGG GATAAATCAA GGAGGAGACT GCGCTGGTGC AGGGCGTGGT
CTCCATGGCG TTGCCCGTAT TCCCCGCCGA GAGGGAACGG TCCACGGTAA GGCAAAGCTC
TGCCCTACCT GCGTTCAGCA GGACCTCCTT GAACTGGGTT ATGCATACTG GCATCGATCA
CACCACTTGC CTGGTGTGTC AGTCTGTTGG CGCCATGGCG ACTCGCTGAT GCATGCGTGT
CCCAAATGCT CTCACCCGTT CTTTCGAAAG CTGCGGTTAC TTCCTGGCCT ATCAGAGCCC
TGCGTATGTG GTTGGAGCGC TCTCGCCCCT GCGAAAGCTA ATCAAGGCAT TCAGCTTGAT
AAGAAGTTTG CGGAATTCGC GCATGAGCTT TTACAACGCA ATTTACCCCT GATTAGCAGC
GATGCGTTAT GTTCTAGCTA CCTACGGCAA TGCAGAAAGA AAGGTTTTGT ACACGGAAGG
TTAGCTGGCA CAGCAAAGTT ATTTAACAGC ATTCGGGATA AGTATGGTGA TGAAGCTTTG
TCACAAATGG ATAGCGCATA CGCAACGGGC AAACATGAAC AATGGATAAG ATTTACTTCT
TATAAGGGCC AGATGGATAT GCCCCTTGCG CGGCATATGA TCATTGCGCT GCATTTGTTT
GGTAGCGTTG ATAATTTTGA GGACGCCTTA AAGAAAGAAT CCATTCTTCA GAGCGTTGCA
GGTGCCAGGT TAGCATCGCT GCAGGAAAAG CCAAAGGTCG GGAGTAAGGC GCAGTTTCGA
CAGAAAATCG AAACCGTTCT TGCGGTCCGA GCTGAAGCCA GCCTGGAGTA TCTTTGGACG
AGCGCGTACA AAGCAACTCG GTGGCTTTAT GAGAATGACA AAGCATGGCT GATGGCGAAG
ATAAGCACGC CAAAACGTGA GCATGCTGAG GTCGAAGACG TTAGCGACTC CAGAGATAGC
GCGTTTGCCG CGATCCTTCT CGAGGGGGGT AAGGATCTAT ATAGGATTTC CAGAAGGCAA
AAACGGGTTA ATTTAAGCAA TTTGCAAAAA CTACTCCCAG TCCGTTTACC TCCGGACCCG
TCGACGCGGA AGAGCAAATT CCCCTTAGCC TCTCAGCGAG TTGAGATACT CTTGGAGTCG
GTCTGGCATT TTCGGTTGAG GAGGTTAGTT TGTGCTCTAT CCGACATGAC ACGGCTAAAT
CTCCCTATAA ATATTGGAAG TCTTTACACA GTGTCCAGTG TGCCAGGTCC TGTGTTCCAA
GCCATCGTCA GCTTTTTCGA ATGGGACTTG GAGAGTTTTG CAAGAAATGG CGTAGACCCA
GATGCTTTAC TCAAGTCGAC CGGCGTATCT CGGGATTGGC AGGGACCTCC AGGTTTCAAT
GTGGCTCTAG GGGGAAATGC GTACTATCAC AATAAAAACG TGGGTGGGTT TGTCGTAAGA
GTAGAAGGCT GA
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| Protein sequence | MSDLLFFPIS MPGETLHSRI TRYHFLSGNK TAGETFRDLF GSATFSVGML PKQIEVLATR
LPGDTESNLD ELIFTNTTFP LYRPFLGINQ GGDCAGAGRG LHGVARIPRR EGTVHGKAKL
CPTCVQQDLL ELGYAYWHRS HHLPGVSVCW RHGDSLMHAC PKCSHPFFRK LRLLPGLSEP
CVCGWSALAP AKANQGIQLD KKFAEFAHEL LQRNLPLISS DALCSSYLRQ CRKKGFVHGR
LAGTAKLFNS IRDKYGDEAL SQMDSAYATG KHEQWIRFTS YKGQMDMPLA RHMIIALHLF
GSVDNFEDAL KKESILQSVA GARLASLQEK PKVGSKAQFR QKIETVLAVR AEASLEYLWT
SAYKATRWLY ENDKAWLMAK ISTPKREHAE VEDVSDSRDS AFAAILLEGG KDLYRISRRQ
KRVNLSNLQK LLPVRLPPDP STRKSKFPLA SQRVEILLES VWHFRLRRLV CALSDMTRLN
LPINIGSLYT VSSVPGPVFQ AIVSFFEWDL ESFARNGVDP DALLKSTGVS RDWQGPPGFN
VALGGNAYYH NKNVGGFVVR VEG
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