| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5551 |
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| Symbol | |
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| ID | 1187243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6322889 |
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| End bp | 6324643 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396870 |
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| Product | ABC transporter, permease protein |
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| Protein accession | NP_795275 |
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| Protein GI | 28872656 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4986] ABC-type anion transport system, duplicated permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTCTA TATTTGAACT CGGTAAAAGC CTGCGTGCGC CCCGTTTTGT AAAACCCGGT
GCGCGTAATA CGTATTGGGC CGATGGTCTT TGTCTGGCCT TACTTGCGCT GTTTGTCGCG
CTGGTGCTGT TTGGCGCAGG TCAGATGCTG CAGCCGATTG AAGTGCTTAC TTCAAGCCCG
ATGAGCCTCG ACCCTGCACG GTTGCCCGAG TACGCATTGC GCACCACGCT GCGCATGTTC
ATTGCGCTGG CGGCGTCGTT GATCTTTACC TTTGTCGTGG CCACGCTGGC GGCCAAGAGC
CGCAAGGCCG AGCACGTCAT CATTCCTGCG CTGGATATTC TTCAGTCGGT TCCGGTGCTG
GGTTTTCTGA CCTTCACGGT GACGTTCTTC ATGGGCCTGT TTCCTGGCCG GCAATTGGGC
GTCGAGTGCG CCGCCATCTT TGCCATCTTC ACCAGTCAGG CGTGGAACCT GGCGTTCAGC
TTTTATCAGT CACTGCGCAC CGTGCCCAGC GACCTGAGTG AAGTCAGCCG CCAGTTCGGC
CTGTCCCCTG TGTTGCGCTT TACCCGGCTG GAACTGCCGT TCGCCATTCC GGGGCTGGTG
TGGAACATGA TGATGTCGAT GTCCGGCGGC TGGTTTTTTG TGGTGGCCTG CGAGGCGATT
TCGGTCGGCG ACACCACCGT CAACCTGCCC GGCATCGGTT CCTGGCTGGC GCTGGCCATC
GAGCAGAAAA ACCTTGCCGC GATTGCCTGG GCCGTCGGCG CAATGGCGCT GGTGATTCTG
GCCTACGACC AGTTTCTGTT TCGCCCGATA GTGGCGTGGG CGGACAAATT CCGCTTCGAG
CAAACCGCAT CGTCCAAGCG TCCCCGCTCC TGGATGTACA GCCTGCTGGG CCGCTCGCGT
GTGGCACCCA TGCTGAGCGC GCTGCTGGCG GCACCGTGGA AAGGCCTGAT GCTGATCAAC
GGGCGCGGTG TTTCCCGGCT GTGGAAAGTG AAGCCCACGC CCGGTGTCGT GCGTGTTATC
GACTACCTGT GGCTCGCGCT GGTCATGGCG GGTTGCCTGA CCGCCAGTGT CTACCTGTTC
CGTTTCATCG AGGCGTCATT GGGCTTGAGC GACATGGTCG GCGCGTTTGG TCTGGGGCTG
GCGACCATGC TGCGGGTAAT CGTGCTGATC GCCATTGCCA GCGTGATCTG GGTGCCCATC
GGTGTGTGGA TCGGCCTGCG CCCGGTCTGG GCTGAGCGGT TGCAGCCGAT TGCGCAGTTC
ATGGCAGCGT TTCCGGCCAA CGTGCTGTTC CCCTTCGCGG TGATCGCCAT CGTCGGCCTG
CACCTCAACC CGGACATCTG GCTGTCGCCA CTGATGGTGC TCGGCACCCA GTGGTACATC
CTGTTCAACG TGATCGCCGG GGCCAGCGCA CTGCCGACTG ACCTGCGCGA AGCGGCCAGC
ATGTTCAACA TGCGCGGTTG GCAATGGTGG CGTCGTGTGG CGCTGCCGGG CGTGTTTCCT
TACTACGTCA CCGGCGCGCT GACGGCGTCG GGCGGTTCAT GGAACGCTAG CATCGTCGCG
GAAGCCGTGT CGTGGGGCGA TCAGCATCTG CAGGCGGCCG GGCTGGGTTC CTACATCGCC
AACGCGACTC AGGCGGGTGA TTTTCCACGC GTCGCGCTGG GCATTGTCGT CATGTCGATT
TTTGTGATCG CGTTCAACCG GTTGCTGTGG CGCCCGCTGT ACGGGTTTGC CGAGCGACGT
CTGAGTCTGG TGTGA
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| Protein sequence | MHSIFELGKS LRAPRFVKPG ARNTYWADGL CLALLALFVA LVLFGAGQML QPIEVLTSSP
MSLDPARLPE YALRTTLRMF IALAASLIFT FVVATLAAKS RKAEHVIIPA LDILQSVPVL
GFLTFTVTFF MGLFPGRQLG VECAAIFAIF TSQAWNLAFS FYQSLRTVPS DLSEVSRQFG
LSPVLRFTRL ELPFAIPGLV WNMMMSMSGG WFFVVACEAI SVGDTTVNLP GIGSWLALAI
EQKNLAAIAW AVGAMALVIL AYDQFLFRPI VAWADKFRFE QTASSKRPRS WMYSLLGRSR
VAPMLSALLA APWKGLMLIN GRGVSRLWKV KPTPGVVRVI DYLWLALVMA GCLTASVYLF
RFIEASLGLS DMVGAFGLGL ATMLRVIVLI AIASVIWVPI GVWIGLRPVW AERLQPIAQF
MAAFPANVLF PFAVIAIVGL HLNPDIWLSP LMVLGTQWYI LFNVIAGASA LPTDLREAAS
MFNMRGWQWW RRVALPGVFP YYVTGALTAS GGSWNASIVA EAVSWGDQHL QAAGLGSYIA
NATQAGDFPR VALGIVVMSI FVIAFNRLLW RPLYGFAERR LSLV
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