Gene PSPTO_5536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5536 
Symbol 
ID1187228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp6304618 
End bp6305235 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content62% 
IMG OID637396855 
ProductCDP-alcohol phosphatidyltransferase family protein 
Protein accessionNP_795260 
Protein GI28872641 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTTCTA TCTACCAGCT CAAACCGCGC TTTCAAAATC TGTTGCGCCC GCTCGTTCAG 
CGCCTGTACG AGCGCGGCAT AACAGCCAAT CAAGTCACGC TCGCGGCGTG CGCCATCTCA 
GTGCTGATCG GTGCCGTCGT GGCCATGGCG ATCCCGCATT ACTGGGTGTT TGCACTGATC 
CCTGCGTGGA TGATCGTGCG CATGGCGCTC AATGCCATCG ACGGCATGCT GGCCCGCGAG 
TTCGGCCAGA AGTCCCGGCT TGGCGCGTAC CTCAACGAAC TGACCGATGT CATCGCCGAC 
AGCGCGCTGT TTCTGCCTTT TGCGCTGCTT GTCGATGTCA GCCCGGGCCT GGTGCTGCTG 
GTGACCCTGC TGGCGATTTT CAGCGAATAC GCAGGCGTGC TCGGCCCGAT GGACGGTGCA 
TCACGACGCT ACGACGGCCC GATGGGCAAA AGCGACCGCG CACTGGTCTT CGGCGTGCTC 
GGCGCAGGCG TCGCCATTGG CTGGCTGCCC GCCCTGTGGA TAAACGTGAT TCTGCTCCTC 
GTCTGTGCGC TGCTGGTGTA CACCCTGTTC AACCGCGTGC GGCGCGGCCT GAGTGAAGCA 
CCCTCCTCCC AGCAATAA
 
Protein sequence
MISIYQLKPR FQNLLRPLVQ RLYERGITAN QVTLAACAIS VLIGAVVAMA IPHYWVFALI 
PAWMIVRMAL NAIDGMLARE FGQKSRLGAY LNELTDVIAD SALFLPFALL VDVSPGLVLL 
VTLLAIFSEY AGVLGPMDGA SRRYDGPMGK SDRALVFGVL GAGVAIGWLP ALWINVILLL 
VCALLVYTLF NRVRRGLSEA PSSQQ