| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5482 |
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| Symbol | |
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| ID | 1187174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6246533 |
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| End bp | 6247426 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396801 |
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| Product | response regulator |
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| Protein accession | NP_795206 |
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| Protein GI | 28872587 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.420057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGG TCAGTGTATT GGTGGTGGAT GACGCGACTT TCATTCGCGA CTTGGTCAAG
AAAGGGCTGC GCAATTATTT TCCCGGGATT CATACCGAGG ACGCGGTCAA CGGTCGCAAG
GCTCAGGCAT TGCTGAGCAA AGAGTCGTTC GATCTGATTC TGTGCGACTG GGAAATGCCC
GAGATGTCCG GCCTTGAGTT GTTGACATGG TGCCGCGAGC AAGACAATTA CCTGAAAACC
GTTCCGTTCA TCATGGTGAC CAGCCGTGGC GACAAGGAAA ACGTCGTGCA GGCGATCCAG
GCCGGCGTCA CCGACTTTGT CGGCAAGCCA TTCACCAACG AGCAGTTGCT GAGCAAGGTC
AAGAAAGCGC TGGCCAAGGT CGGCAAGCTG GACGCGGTCA TGTCCACGGC CCCGGCGCGC
ATGAATTCGC CGCTCAACGA CTCGCTCAGT GCACTGACAG GCGGCAAGGC CGAGGTGGTT
CGCGCCACGT CTGCTGCAGC GCCTGCCAGT ATCCCTAAAG CACCGCCAGT CGCAGCAGTC
CGCTCGGCAG AGCCTACCGG TCGTGGTCAG GGTCAGTTGC GCCTGCCCAA CGGTACTCAG
CCTTGCGTGA TCAAGGCCCT GAGCCTGAAA GACGCCACGC TGGTGGTGCG CGTCAGCGAA
AAGCTGCCGC AGGTACTCGA GAGCGCGGTA CTGGACCTTG AGCAGGGCGA AAGCAACGAA
GTTGCACGTC TGAACGGCTA CCTGCACTCG GTTGCTGCGT TCGAGCAGAA GCCTGACAGC
GAATGGCTGC AAGTGACCTT CCGCTTTGTC GATCAGGATG CACAGAAGCT GGATTACCTG
TCGCGTCTGA TCGCGCGCGG CACGGCGCAG AAGCACTTCG TTCCGGGGGC CTGA
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| Protein sequence | MSKVSVLVVD DATFIRDLVK KGLRNYFPGI HTEDAVNGRK AQALLSKESF DLILCDWEMP
EMSGLELLTW CREQDNYLKT VPFIMVTSRG DKENVVQAIQ AGVTDFVGKP FTNEQLLSKV
KKALAKVGKL DAVMSTAPAR MNSPLNDSLS ALTGGKAEVV RATSAAAPAS IPKAPPVAAV
RSAEPTGRGQ GQLRLPNGTQ PCVIKALSLK DATLVVRVSE KLPQVLESAV LDLEQGESNE
VARLNGYLHS VAAFEQKPDS EWLQVTFRFV DQDAQKLDYL SRLIARGTAQ KHFVPGA
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