Gene PSPTO_5469 details

Gene Information

• Locus tag: PSPTO_5469
• ID: 1187161
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 6230154
• End bp: 6232115
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637396788
• Product: hypothetical protein
• Protein accession: NP_795193
• Protein GI: 28872574

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGGCGGT TTCGCGCCTG GCTGCTTGCT GGCGCGCTGT CGCTGGTCGG GACACCTGCC 
TTTGCCAGCC TGAAGCTGGA ACTGCAGGCC GATGGCCTCA ACGCCGCCCA ACAGCAAGCC 
AGCCAGACGC TGCTCGACGA AGCCATGCAG GCGCTGCCAC CCGGTTTCGT CGAGACGCTG 
GACCGTACCG TCGAGGTGAG CTGGTCCGGT GACATGCCGC AAAACGCCTA TGGCCAGGCT 
GCCGGCCCTT ATCAGTTGTA CCTCAACAGC CATTTGCTGG CTGCGTTGAC CGACGGCTCG 
GCGGCCACAG CCCAGACAGG CCGACCACAT GGCACGGTTC GCCGGGAAAT GCTCGCCACC 
GTCCTGCATG AACTGACCCA CGTGTACGAC CGCGCTCGTC TGTGGTCACC CGCCGAGAAG 
GCGGCTATTT TCCGCTGCGC CTCGCGTAAC AATTCGCTGG GCAAGATCGG CCTGCCCGAC 
AGCTGTCGCG GTCAGACCGA ACGACGCTTC ACCCTGAGCG ACGATCCGCG CCTGCTGGAC 
CTCGCCGGCT GGCAGCAATA TGTCGGACGC CGCGGTGAAC GCGAAGAACA TAACGGCCAG 
GTCGCGCGCA GCCCGGACAT TTACGAAACC ACCAGCCCGC TGGAATTCGT GGCCGTCAAT 
ATGGAGTATT TTCTCCTCGA CCCGGCCTAC GCCTGCCGTC GCCCCGCGCT GTATGCCTAT 
TACAAGCAGC GCTTCGGCTG GGCACCTGCG GCACGCGATG AATGCCCGAC GTATTACCCG 
TACCTGAACG CCGGCAGCGA CTTCGGCCGA GAGCCCTTGG GCAAGCTGGA CCCGGAGCGG 
GTCTATGCGG TCGATTACCT GCTGGCCGAG GCGAACCAGA ACTGGGCAAG CCGCTGGGGT 
CACAGCATGT TGCGGCTGGT GATCTGCAAA CCCGGTCGCC CGCGCGGCCC GGATTGCCGA 
CTGGACCTCG ACCAGCATCT GGTTCTGTCT TACCGGGCGT TTGTCGGCGA CGTGCAGCTC 
TCGAGCTGGG ATGGCCTGAT GGGTGCGTAC CCGTCACGGC TGTTTGTGCT GCCGCTTGCT 
CAGGTCATTG ATGAATACAC CAAGACCGAA CTGCGCAGCC TGGCATCGGT GCCGATCACG 
CTGTCCCGCC CGGAGATCGA AGGGCTGGTT CAGCATGCTG CCGAGATGCA CTGGAGCTAC 
GACGGCAACT ACTACTTTCT CTCGAACAAC TGCGCGGTTG AAAACCTCAA ACTGTTGCGC 
AGCGGCACGC ACAATCCCAA GCTGGTCGGC CTGGACAGCA TTCTGCCCAA CGGTTTGCTT 
GAAGTGCTTA AAGGCCGTGG GCTGGCGGAT ACCAGCGTGC TGGACGACCC CAAGGAAGCG 
CTGCGTCTGG GCTATCGATT CGACTCCTAC CGCGATCGTT ATCAGGCGAT GTTCGAGGTA 
TTGAAGAAAT ACCTGCCGAT CAAGCAGAAC ACCGTCGAAG AATGGATGAC CCTGTCCGCC 
AGCGAACGCA GCCAATGGTT CGAGAAGGCT GACCTGCGCA CCAGTGCCGC CATCCTGCTA 
CTGGAACAGG CGAGCCTGCG TCGGCAATTG CTGCTGGCAC AGGATGAAGT CAAGCAACGC 
TATCTGGGCG CACGGCAGTT GAACGACGGC AGGGTTTCCA AGGCAACCAC GACGCTGCAG 
GAGATTCTTG CCAGCAGCGG CTTTCTGAGT CGCCCTGCCG AGCTGCTGGG CAGCGACGGT 
TATGGCTTGC CGCAGGCCAG TGAATGGCAG CGTCTTGAGG CAGAAAGCAG TCAGCGCCAG 
AAACAGCTCA AGCGCCTGAC CGGCGATCTC GACAAGGAAG TGCGCGCATT GCTGGAGCCT 
GAACGGGCCA AGGAAATCGC AGCCAACGAA AACAATCTGA AACAGATGGG CGAACACCTT 
CGCGCGCTGC ACAAAGCAGC AGGCGGTCTG CAACTGCCTT GA 

 

Protein sequence

MRRFRAWLLA GALSLVGTPA FASLKLELQA DGLNAAQQQA SQTLLDEAMQ ALPPGFVETL 
DRTVEVSWSG DMPQNAYGQA AGPYQLYLNS HLLAALTDGS AATAQTGRPH GTVRREMLAT 
VLHELTHVYD RARLWSPAEK AAIFRCASRN NSLGKIGLPD SCRGQTERRF TLSDDPRLLD 
LAGWQQYVGR RGEREEHNGQ VARSPDIYET TSPLEFVAVN MEYFLLDPAY ACRRPALYAY 
YKQRFGWAPA ARDECPTYYP YLNAGSDFGR EPLGKLDPER VYAVDYLLAE ANQNWASRWG 
HSMLRLVICK PGRPRGPDCR LDLDQHLVLS YRAFVGDVQL SSWDGLMGAY PSRLFVLPLA 
QVIDEYTKTE LRSLASVPIT LSRPEIEGLV QHAAEMHWSY DGNYYFLSNN CAVENLKLLR 
SGTHNPKLVG LDSILPNGLL EVLKGRGLAD TSVLDDPKEA LRLGYRFDSY RDRYQAMFEV 
LKKYLPIKQN TVEEWMTLSA SERSQWFEKA DLRTSAAILL LEQASLRRQL LLAQDEVKQR 
YLGARQLNDG RVSKATTTLQ EILASSGFLS RPAELLGSDG YGLPQASEWQ RLEAESSQRQ 
KQLKRLTGDL DKEVRALLEP ERAKEIAANE NNLKQMGEHL RALHKAAGGL QLP