Gene PSPTO_5382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5382 
Symbol 
ID1187069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp6115993 
End bp6116622 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content60% 
IMG OID637396699 
Productacyl carrier protein phosphodiesterase, putative 
Protein accessionNP_795109 
Protein GI28872490 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATTC TTCATATCGC CAGCTCTCCT CGTGGAGAGC GCTCCGTTTC GCTGAAACTG 
GCCTCGCGCT ACCTTGAGAC GCTGACCTCG CTTCATCCTG AATCCACCGT GGATGTTCTG 
GACGTGTGGA CGATTGATCT GTTGCCCTTC GACGGCCCTG CTCTGGAGGC CAAATACGCC 
GACCTCCAAG GTGTGCAAAT GAGCGACGAG CAGCAGGCGG TATGGAAGCA GATCCACGCG 
CTGGGCGAGC GTTTCCACCG AGCCGACGTC ATCCTGTTCA GTGTGCCGAT GTGGAATTTC 
GGTGTTCCCT ACCGCCTCAA GCATTTGATT GACTCAGTCT CGCAGCGCGG CGTGCTGTTC 
GAGTTTGATG CCCAAGGCAT GCGCGGCCTG CTCAAGGGCA AGAACGTGGT GGTGTTCGCC 
TCTCGCGGGG TAGCACTTGG GGAAGATTTC CCCACCGAAG CCTATGACCA TCAAGTCGCC 
TACCTCAAAA CCTGGGCACG GATGGTGGGT ATCCCGACCA TCGACGCGGT GCTGTCGGAA 
GCGACGCTCG CAGATCCGGC GACGGCGGAG GCTAATTTCA CTGCGGCGCT GGCCGAGGCG 
TCGAAGCTGG CGGCGGCAGT CCAACCATGA
 
Protein sequence
MHILHIASSP RGERSVSLKL ASRYLETLTS LHPESTVDVL DVWTIDLLPF DGPALEAKYA 
DLQGVQMSDE QQAVWKQIHA LGERFHRADV ILFSVPMWNF GVPYRLKHLI DSVSQRGVLF 
EFDAQGMRGL LKGKNVVVFA SRGVALGEDF PTEAYDHQVA YLKTWARMVG IPTIDAVLSE 
ATLADPATAE ANFTAALAEA SKLAAAVQP