| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5360 |
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| Symbol | |
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| ID | 1187046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6092269 |
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| End bp | 6092958 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637396679 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | NP_795090 |
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| Protein GI | 28872471 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.209442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTGGG AAGTCATCAT CAAATGGTTG CCGCGACTGG CGCAGGGCGC GACCCTGACC
CTGGAGCTGG TGGCCATTGC CGTCATCGCC GGTCTCATCC TCGCCATCCC GATGGGCATC
GCTCGCGCGT CGCGGCACTG GCCAGTGCGC GCCCTGCCTT ACGCCTACAT CTTTTTCTTC
CGTGGCACGC CGCTGCTGGT GCAGTTGTTT CTGGTCTATT ACGGCCTGGC GCAGTTCGAT
GCCGTGCGTC AGGGGCCGCT GTGGCCGTAC CTGCGCGACC CGTTCTGGTG TGCGGTTGTT
ACCATGACCC TGCACACCGC CGCCTATATC GCGGAAATCC TGCGCGGCGC AATTCAGGCC
GTGCCGGTCG GTGAAGTCGA GGCTGCGCGG GCGCTGGGCA TGTCGAAATG GAAAGCGCTG
TTCTACATCG TCCTGCCGCG CGCCGCGCGC ATCGGCCTGC CCGCCTACAG CAACGAAGTG
ATCCTGATGC TCAAGGCCAG CGCGCTGGCC AGCACCGTCA CCCTGCTGGA ACTGACCGGC
ATGGCGCGTA CGATCATCGC CCGCACTTAC TTGCCGGTGG AGATCTTCTT CGCCGCCGGC
ATGTTCTACC TGGTGATGAC ATTCGTGCTG GTGCAAGGCT TCCGCCTGCT GGAAAAGCTG
CTGCGTGTAG ACGCAAGTCA GGGGCGCTGA
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| Protein sequence | MNWEVIIKWL PRLAQGATLT LELVAIAVIA GLILAIPMGI ARASRHWPVR ALPYAYIFFF
RGTPLLVQLF LVYYGLAQFD AVRQGPLWPY LRDPFWCAVV TMTLHTAAYI AEILRGAIQA
VPVGEVEAAR ALGMSKWKAL FYIVLPRAAR IGLPAYSNEV ILMLKASALA STVTLLELTG
MARTIIARTY LPVEIFFAAG MFYLVMTFVL VQGFRLLEKL LRVDASQGR
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