Gene PSPTO_5295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5295 
Symbol 
ID1186980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6021581 
End bp6022018 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content58% 
IMG OID637396614 
Producthypothetical protein 
Protein accessionNP_795026 
Protein GI28872407 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCCT TATTTTCTGG AACGGTGGTA GCAGGTCTGT TGCTGAGTGC GTCCATGCTG 
GTCAGCGCTG CAGAAATGCC GCAGACCGCA TCGCCTGAAG GTGCCGAGGT GTACATCATT
TCGCCCAATG ATGGCGAAAC GGTGACCTCG CCGTTCAAGG TGCAATTCGG CCTCAAAGGC
ATGGGCGTCG CGCCAGCCGG TGTGGACGTG CCCGAGACCG GTCACCACCA CCTGCTGATC
GATGTGAAAG ACCAGCCCGC CGCAAATATG CCGTTGCCGG TCAGCGACAA CATCCGCCAC
TTCGGCAAAG GCCAGACCGA AACCGAACTC AACCTGCCGC CAGGCCAGCA CACTCTGCAA
TTGCTGATGG GCGACAAAGG CCACATGCCG CTGAACCCTT CGGTCGAGTC GAAGAAGGTC
ACGATCAATG TGAAGTAG
 
Protein sequence
MKSLFSGTVV AGLLLSASML VSAAEMPQTA SPEGAEVYII SPNDGETVTS PFKVQFGLKG 
MGVAPAGVDV PETGHHHLLI DVKDQPAANM PLPVSDNIRH FGKGQTETEL NLPPGQHTLQ
LLMGDKGHMP LNPSVESKKV TINVK