| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5211 |
|---|
| Symbol | |
|---|
| ID | 1186896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 5932029 |
|---|
| End bp | 5932424 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637396530 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_794942 |
|---|
| Protein GI | 28872323 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3755] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAATAA ATTTTAGATT TGTTTTAGTT TTAGCCTCGC TCTATTTTCT GCCAGCGCAC
GCTGAGTGCA TCAATAGCGG TACGAGCCAA GAAGTTGACG AGTGTGCAAA GGCAGAAAAA
AATACCGCAG ATGCCCGCCT AAACGGCAGT TATAAAAAAT TAATAGCCAG AGCTCAAGGT
CAATATAGGT CAGATGCTAG ACTTGGCGAT GAATTCAAAG CGAAACTAAA AGATTCGCAG
CGCGCATGGC TAAGGTTACG TGATACGAAT TGCCCACTTG AAGCGTTTGA AATAGAAGTT
GGGCAGGCTG CTTACCTGAC AACAATTAAT AATTGTGTTG CGGGGATGAG CCTGGAACGT
GCGGCTTATT TGGATAAATT ATTGCCCGAT ATTTAA
|
|---|
| Protein sequence | MKINFRFVLV LASLYFLPAH AECINSGTSQ EVDECAKAEK NTADARLNGS YKKLIARAQG
QYRSDARLGD EFKAKLKDSQ RAWLRLRDTN CPLEAFEIEV GQAAYLTTIN NCVAGMSLER
AAYLDKLLPD I
|
|---|
| |