Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5201 |
Symbol | |
ID | 1186886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5921091 |
End bp | 5921993 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637396520 |
Product | hypothetical protein |
Protein accession | NP_794932 |
Protein GI | 28872313 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTTAT GGAGCATTGT GCCAACGTGG CTCGATATAG AACGACGTTT TAGCCAAAGC ATGGGCTACC AGCCTGGCGC CAGCTTCCAG CGCAGCCCCA ACAACGAGCC TGTTTCGACG TTACAGCTCA ACCTTCGCCG TATCAGCAAT ATCAGAACCG CATTCATCCG CGCCGAATGG CAAGCGGCCC GCCGACTTGG GCGGCGTTTC GCAGACATCG ACATCGCCAG CATCATCAAC GACCTGATAG ACGTGGTTAG CCAAATGGCC ATGATCGTCG CCGGCAGTAC GCTCGTCGGA GGCGCGATAG GTGCAGGGAT CGGCTTCGGT TTCTTTGGGA TCGGCGCGCT TCCTTCTGGC GCAGCGGGTG CCGCCATCGG CCTGGAAGTC AGCACCTGGA TCCTGGCGAT TCTCGGCCTG GCCTCCATCG CCGAATTTTT CGTCGACGGC CTTCCGCAGA TTTTCGACCA TTACGTGCGT GGCATCAAAG TCGCCTGGGA AGGCACCCGT GGCGAGCCTG GCCTCAACCC TTTCGGCGGC GATGATCCCC AGGTTGTAGA CCGCGCCGCC TATCACATCG CCCAAGGCCA CGAAGAAATG GTGATACTGC TACTGGGCGC CATCGTCGCC TACCTGACGC GCGGCCGAGG CAATGCAAGC GTGCTTGCCA GCGAAATGCA GGCCAGTTCA AGAGGTGCAA AGCTGGGCCA ATGGATGCTC CAGCACGAAG AAGCCCTGAG AAGACACCCC GACCTGCAAA ACGCCGGCCC TCGCAGAGGG GCGCTGGACA AACCGGAGTC ACCGCCCCCG CCTCCACCAC CCAATCGACG TGCGGACGAG CCTGAGCCGA AGAAACCGTT GGGTATGGCG GAGCATGAGG TGCCATGCTT TAAGGTGGGG TAA
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Protein sequence | MPLWSIVPTW LDIERRFSQS MGYQPGASFQ RSPNNEPVST LQLNLRRISN IRTAFIRAEW QAARRLGRRF ADIDIASIIN DLIDVVSQMA MIVAGSTLVG GAIGAGIGFG FFGIGALPSG AAGAAIGLEV STWILAILGL ASIAEFFVDG LPQIFDHYVR GIKVAWEGTR GEPGLNPFGG DDPQVVDRAA YHIAQGHEEM VILLLGAIVA YLTRGRGNAS VLASEMQASS RGAKLGQWML QHEEALRRHP DLQNAGPRRG ALDKPESPPP PPPPNRRADE PEPKKPLGMA EHEVPCFKVG
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