Gene PSPTO_5201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5201 
Symbol 
ID1186886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5921091 
End bp5921993 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content61% 
IMG OID637396520 
Producthypothetical protein 
Protein accessionNP_794932 
Protein GI28872313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTAT GGAGCATTGT GCCAACGTGG CTCGATATAG AACGACGTTT TAGCCAAAGC 
ATGGGCTACC AGCCTGGCGC CAGCTTCCAG CGCAGCCCCA ACAACGAGCC TGTTTCGACG
TTACAGCTCA ACCTTCGCCG TATCAGCAAT ATCAGAACCG CATTCATCCG CGCCGAATGG
CAAGCGGCCC GCCGACTTGG GCGGCGTTTC GCAGACATCG ACATCGCCAG CATCATCAAC
GACCTGATAG ACGTGGTTAG CCAAATGGCC ATGATCGTCG CCGGCAGTAC GCTCGTCGGA
GGCGCGATAG GTGCAGGGAT CGGCTTCGGT TTCTTTGGGA TCGGCGCGCT TCCTTCTGGC
GCAGCGGGTG CCGCCATCGG CCTGGAAGTC AGCACCTGGA TCCTGGCGAT TCTCGGCCTG
GCCTCCATCG CCGAATTTTT CGTCGACGGC CTTCCGCAGA TTTTCGACCA TTACGTGCGT
GGCATCAAAG TCGCCTGGGA AGGCACCCGT GGCGAGCCTG GCCTCAACCC TTTCGGCGGC
GATGATCCCC AGGTTGTAGA CCGCGCCGCC TATCACATCG CCCAAGGCCA CGAAGAAATG
GTGATACTGC TACTGGGCGC CATCGTCGCC TACCTGACGC GCGGCCGAGG CAATGCAAGC
GTGCTTGCCA GCGAAATGCA GGCCAGTTCA AGAGGTGCAA AGCTGGGCCA ATGGATGCTC
CAGCACGAAG AAGCCCTGAG AAGACACCCC GACCTGCAAA ACGCCGGCCC TCGCAGAGGG
GCGCTGGACA AACCGGAGTC ACCGCCCCCG CCTCCACCAC CCAATCGACG TGCGGACGAG
CCTGAGCCGA AGAAACCGTT GGGTATGGCG GAGCATGAGG TGCCATGCTT TAAGGTGGGG
TAA
 
Protein sequence
MPLWSIVPTW LDIERRFSQS MGYQPGASFQ RSPNNEPVST LQLNLRRISN IRTAFIRAEW 
QAARRLGRRF ADIDIASIIN DLIDVVSQMA MIVAGSTLVG GAIGAGIGFG FFGIGALPSG
AAGAAIGLEV STWILAILGL ASIAEFFVDG LPQIFDHYVR GIKVAWEGTR GEPGLNPFGG
DDPQVVDRAA YHIAQGHEEM VILLLGAIVA YLTRGRGNAS VLASEMQASS RGAKLGQWML
QHEEALRRHP DLQNAGPRRG ALDKPESPPP PPPPNRRADE PEPKKPLGMA EHEVPCFKVG