| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5179 |
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| Symbol | |
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| ID | 1186864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5894631 |
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| End bp | 5895629 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637396498 |
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| Product | pyridoxal phosphate-dependent deaminase, putative |
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| Protein accession | NP_794910 |
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| Protein GI | 28872291 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
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| TIGRFAM ID | [TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAAA ATCAGCTTGC CCGCTTCAAT CGTCTGGACT TGATCAGCGC GCCAACGGCC
CTGGAAAAGC TTGAGCGCCT GTCGCTGTGG GCAGATCGCG ACATCTACAT CAAGCGTGAT
GACACCACCA CGCTCGCGCT GGGCGGCAAC AAGGTGCGCA AGCTTGAATA CCTGGCCGCC
GATGCGCTGG CTCAGGGTGC CGACACACTG ATCACGGCCG GCGCAATCCA GTCCAACCAT
GTACGCCAGA CGGCAGCCCT GGCGGCGCGG CTGGGGCTGG GCTGCGTGGC CCTGCTGGAA
AACCCCATCG GCACCGAAGA CCCGAGTTAC CTGAAAAACG GCAACCGCCT GCTGCTGGAA
CTGTTCGATG CCAAGGTCGA GCTGGTCGAA AACCTCGATA ACGCCGACGA CCAGTTGCAT
GCCTTGGCTG CGCGCCTGCG CTCCAGCGGC AAGAAGCCGT ATCTGGTGCC TATCGGTGGC
TCAAGCCCGG TTGGTGCACT GGGGTATGTC CGCGCCGGGC TGGAACTCGC CGAGCAGATC
AAACAGACCG GTATCGACTT TGCGGCCGTG GTGCTGGCAT CGGGCAGTGC GGGTACGCAC
AGCGGCCTGG CGTTGGCGCT GGCTCATGAG TTGCCGCAGT TGCCGGTGGT CGGCGTGACC
GTGTCGCGCA GTGAAGAAGC GCAGTTGCCC AAAGTGCAAG GCCTCGCCGA GCGCACCGCG
CAACTGCTCG ATATCGCCCT GCCGGAGCAC TTCAAGGTCG AACTGTGGGA CGAGTATTTC
GCCCCGCGCT ACGGCGAGCC AAACGCCGGT ACGCTGGCAG CGATCAAACT GGTGGCCAGC
CAGGAAGGCC TGTTGCTGGA CCCGGTCTAC ACCGGCAAGG CCATGTCCGG CCTGCTGGAC
GGTATCGGCC GTCAACGCTT CAACGACGGG CCGTTGATAT TCCTGCACAC CGGTGGCGCG
CCTGCGTTGT TCGCTTATCC GGATGCGTTT GACCAGTGA
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| Protein sequence | MIKNQLARFN RLDLISAPTA LEKLERLSLW ADRDIYIKRD DTTTLALGGN KVRKLEYLAA
DALAQGADTL ITAGAIQSNH VRQTAALAAR LGLGCVALLE NPIGTEDPSY LKNGNRLLLE
LFDAKVELVE NLDNADDQLH ALAARLRSSG KKPYLVPIGG SSPVGALGYV RAGLELAEQI
KQTGIDFAAV VLASGSAGTH SGLALALAHE LPQLPVVGVT VSRSEEAQLP KVQGLAERTA
QLLDIALPEH FKVELWDEYF APRYGEPNAG TLAAIKLVAS QEGLLLDPVY TGKAMSGLLD
GIGRQRFNDG PLIFLHTGGA PALFAYPDAF DQ
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