| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5144 |
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| Symbol | phaB |
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| ID | 1186829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5855493 |
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| End bp | 5856350 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396463 |
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| Product | poly(3-hydroxyalkanoate) depolymerase |
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| Protein accession | NP_794875 |
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| Protein GI | 28872256 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR02240] poly(3-hydroxyalkanoate) depolymerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCAAC CGTTTGTTTT TCGCTCCATT GACCTGAACG GACACACCAT TCGTACCGCC
GTGCGCCCAG GCAAGAGTCA CCTGACGCCG CTGCTGATAT TCAACGGCAT CGGCGCCAAC
CTGGAGCTGG TGTTTCCGTT TGTCGAGGCG CTGGACCCGG ACTTGGAAGT CATCGCCTTC
GACGTGCCGG GAGTCGGTGG GTCGTCGACA CCCAAACGTC CCTATCGCTT TCCGGGGCTG
GCCAAACTCG CGGCGCGCAT GCTCGATTAC CTGAACTACG GGCAGGTCAA TGCCATCGGC
GTTTCCTGGG GCGGTGCGCT GGCGCAGCAG TTTGCCCATG ACTACCCGGA GCGCTGCAAG
AAACTGGTGC TGGCGGCTAC ATCAGCGGGC ATGGCGATGG TGCCGGGCAA GCCACGGGTG
CTGTGGTTGA TGGCCAGCCC GCGCCGCTAT ATTCAACCGT CCCATGTGAT TCGCATCGCG
CCGGAAATTT ACGGTGGGGC GTTTCGGCGC GACCACAATC TGGCAGCCAA TCACGCTGCC
AAAGTGCGCT CGTCCGGCAA GCTGGGCTAT TACTGGCAGC TGTTTGCCGG CATGGGCTGG
ACCAGCATTC ACTGGCTGCA CAAGATTCAC CAGCCAACGC TGGTGCTGGC CGGCGATGAC
GATCCGCTGA TCCCGCTGGT CAATATGCGC CTGCTGGCCT GGCGAATACC CAATGCCCAG
CTACACATAA TCGATGACGG GCATTTGTTT CTGATTACCC GCGCCGAAGC CGTCGCGCCG
ATCATCATGG GGTTTCTGCA GCAGGAACGA CAACGCGCGG TCATGCACCC GCAGCCCACG
CCAACCCGAA CGCGCTGA
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| Protein sequence | MPQPFVFRSI DLNGHTIRTA VRPGKSHLTP LLIFNGIGAN LELVFPFVEA LDPDLEVIAF
DVPGVGGSST PKRPYRFPGL AKLAARMLDY LNYGQVNAIG VSWGGALAQQ FAHDYPERCK
KLVLAATSAG MAMVPGKPRV LWLMASPRRY IQPSHVIRIA PEIYGGAFRR DHNLAANHAA
KVRSSGKLGY YWQLFAGMGW TSIHWLHKIH QPTLVLAGDD DPLIPLVNMR LLAWRIPNAQ
LHIIDDGHLF LITRAEAVAP IIMGFLQQER QRAVMHPQPT PTRTR
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