Gene PSPTO_5037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5037 
Symbol 
ID1186722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5739092 
End bp5739664 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content61% 
IMG OID637396358 
Producthypothetical protein 
Protein accessionNP_794770 
Protein GI28872151 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TCTCTCCGAG TTATCTCAAG CATCAGTTCC TGATCGCCAT GCCCCACATG 
CACGACGAGA ACTTTGCGCA GACCTTGACC TACGTCGTTG AGCACAACGC CAATGGCGCG 
ATGGGGCTGG TGATCAACCG TCCGCAAAGC CTGACCCTGG CGGATGTGCT CGAGCAACTG 
CGACCGGAAC TGCCTGCGCC AAAACGCTGC CAGGAAATCG CCATCCATGC TGGCGGCCCG 
GTGCAGACCG ACCGTGGGTT TGTCCTGCAC CCCAGCGGCC AGACCTTTCA GGCCACCGTC 
GATCTACCCG GCGGGATTTC GCTGTCGACG TCACAGGACG TGCTGTTTTC CATCGCCGAC 
GGCTACGGGC CTGATCAAAA TGTGATCACC CTCGGTTACG CGGGATGGGA CGCTGGCCAG 
CTGGATGCGG AAATGGCTGA CAATGCCTGG CTGACCTGCT CGTTCGACCC GGCCATTCTG 
TTCGATGTCG ACAGCGATCA GCGCCTCGAT GCCGCAGCCA GACGGCTGGG CATCAATCTC 
GCCCTTATCT CGACTCAGGC GGGGCACGCT TGA
 
Protein sequence
MKKVSPSYLK HQFLIAMPHM HDENFAQTLT YVVEHNANGA MGLVINRPQS LTLADVLEQL 
RPELPAPKRC QEIAIHAGGP VQTDRGFVLH PSGQTFQATV DLPGGISLST SQDVLFSIAD 
GYGPDQNVIT LGYAGWDAGQ LDAEMADNAW LTCSFDPAIL FDVDSDQRLD AAARRLGINL 
ALISTQAGHA