| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5022 |
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| Symbol | |
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| ID | 1186707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5714337 |
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| End bp | 5717465 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637396343 |
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| Product | hypothetical protein |
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| Protein accession | NP_794755 |
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| Protein GI | 28872136 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3774] Mannosyltransferase OCH1 and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGATG AATTTGTAGC AAATCAGAAT GCCGGAAATC CGTTCGGCGA TGACCAGGAT
TCGGACGCAG CGTTCTGGGA ACGAGTATCC GAAGACTTTT CGGTCAGCGA TTACTTCCGC
CTCAACCCGA TCAACCTGCA GTCACCTGCT GCCCTTGCTG CGCGGGATGT GGCACAGGAA
TGCCAGTCAA AGTGGGGTAT CGAGATCGAT CCGGACGACA CTTTGATCAC CACGCTGTAT
ATCGAAGACC CGAAGCTCTA CCCCGCACCT CACCGCGCCA ATGTCGCTCA CTCGATGACG
CTGACCGAGG CGCTGCTGCG CAACTGGCAG CAAAAGGGCA ATGGTGACTG GTTTGATCAC
CTCGGGCATT TGCAGCCCCA TCACGAGGGC GGTCTCGACT GTCAGGTCGT GGATGAAAAA
CTGCCGCCCT ATGACTGCGT CGCTTATGAG GCGGTGTACC GGAAATCCGA TCCGCAGCAC
TACGATTCGA CGACGCAACT GCGCCTGACG GCCGAGGCGT TCAAGCAGTA CATCTGGGAT
CACAACCTGC AAGCCGGCTA TCTCGCCTAC CTGAAACAGT TCTGGCAGGC GCACGCAGAC
GACTACAACC TGATGCTCAA GGCCGGTCTG TTCAGGGCGG CCTGGCTGCA AGCCGAGGAA
AACACGCTCA AGGCCGAGCA CAAGGACATG GTGCTGGAGG CGCTCGGGCT GCCCGCTGAT
CAGGGTTGGA AACAGCTGAG TTTCGACGCT TTTGTCGCCG CGCCGATTTC TACTCGGGTG
ACGATTTCCG AATTGCAGGT GCATGGCTAC AGCGCGGTCG ACATCATGGT CATACGCAGT
GCCGATTCGC CGACCGTGCT GCTCTACATC CCCGGCAACT CGTCACCGAT TCACACCTTC
GCCAACGCTG ATGCGCTCAA GGAGTGGGTC GCGCTGATGT GCAAAGATCC AGGCAAGCGC
CGTTCGTTCG AGGCGCATTT CAGCGCTACG GATGATGTTG ATGGTTTTTT CTACAGCGGC
GTTGCCACTG CCCTGAAAGG CTTTGCGGTC TACCCGAAAC TGCTGGACGC CGCGACCGGC
GCATGGAACC CCCGCAAGCT GGTGCAGTTC GGCGAACCGT TGCAGCCTTG GCCGTTCTCG
CACTTCAAGG ATCGGATCAA GGCAAAGTCC GAAACCGATG CGCTGCAAAA AATCCGCAAC
CACGACGACT ACTGGAAAGA GGAAGTCAGT GGTGGCTTGA GCGAGTGCGT GTCTGTCCTG
GGCGGCGTCG CCATCGTCTT TCCTGAACTG ATTCCGGTCA TCGCGGGGCT GTCTCTTGCG
CTGGTCGGGC TGGGCGTCGA CGCGGCGGTC AATGGCCGCA CGCTGGACGA GCGCCAGGCG
GGGCTTGGGC GGATTGCCTT CGGGGTATTG AACGCATTGC CGATCCTTGC CGAGGAGGGC
GCTGCGGTCG AGGCGGGCGC CGAAATCGGG CTGATTGACG AGGCGGGAGA CGGTTACGAG
GTTTCAGGCA CAACCGCTCC GATCGACCCT GCTGTCGAGG TCGAGCCGAT TCCGGTGTTC
AGGGAAGAAC CACCGGCCTT GCGTTCGCTC GATGCCAAAA TGCGCCGTCT GTTGCGCGCG
CTCGAAGTGA CTCAAGACTT GCCAGGGCTG GCGTCGGGTG AAGTGGCGGG TGTCTATCCG
CTGGAAGGCA AAAGCTACAT AGAGTTGCAT GATCGTGCTT TCCGGGTGGA GTGGGTGCCG
CAGGAAAGAC AGTACCGAAT TCGCTCTGCC TCGGACCCTC GTGTGTGGGG ACCCTATGTG
AAGACTATCG ACACCGGCTA CTGGGACCTG GACCTCAAAC TGGGGTTGCG CGGCGGGGAA
AGCTTCGATG GTTCGCAGCT GCCGCCGGCC AGTGAGGCAG AAAGCGCCAT GCTGCCTGTT
GTGCCTGACG AGCCAGCCGT TGAGATTCAG CGCTGGGGCC CCAAGGTGCA GGTCGAGTTG
CCTCTGGATC AGATCATGAT CGAGGAGGTA CAGAGCCAGG CAAAAGGGAC GGTTGTAGAG
AAGTACTTCA TTCAGATCGG AGGGATCAGG AAGAACGTCT ATTACGATGC CGATATTCCG
TGCTGGCGCA CTGATCCGTC TTCAAACGGA CTGGTCTGGC TGGACCGAAA CGGGGTCTGG
AATAGCGGGT CGGAGAATGC ATTCAGGAAG GAAGAGGCAA AACTGCCACA GAGCCGCCGC
TTTGAGATCT ATTCTTTCCC TCGCGTGCCC AGGTTGCCTG CAGATGCCGA GCCCATCAGC
CGTGTGATTC ATCATATATG GCTGGGCGAA CGAATGCCGG GCGATAACCT GCTGGAAAAG
ATGCTCGACA ACATGCGCAC CAGCCCGGAC TTGCGCTTCG AACTGCATAT CGATATCAAC
CACCCGACGG CGCATCAGCA GTTGCTGGAT TACTTCAGCG CACATCCTCA GATGCAGATT
TCCATGCTCA AGGAAGAAGC GTTCTTTCCC AAGTTCCTGA GTGGCGAAAA TGGCGAAGCC
TTCAACTATT TCATGCACTC GGATAATCGT AATTATGCGG CCGCTTCGGA CATTCTGCGT
TATCGACTGA TCAACGAATA CGGCGGCATT TATCTTGATT GCGATGACAC CCTTGATGTC
CCTTTTGCAG GCATTCCGTT GAAGGCCGGG CCCAATGATG TATTGCTGGG CAGGCGTCTG
GATGCGCAGC AACTGAGCTA CACCGGGCCG GGTAACAGCC ATTTCGCCAG CCACCCGGAC
AACCCTGTCC TGAAGAGGAT CCTGAAAGAA ATAAATACAC GCTTCCAGAA TGAAAAACAG
ACCAACAAGG CGTTTTTCAG TACGCGCAGA CCCTTTATCG ACCACAGCAG TGAAGCATTG
CGTAGCGCCT CGAGAGACCG AATGACACCG TACATGACGC GCATTTCCGA CCTGACCGGT
CCTAAGCTCA TGTCAGACGT CTTGAGAAAG CTGCGACCTG ACTATTTTGA TCTGCTGGAG
CGTTCCTATT TGCCGGTCGA TGAGGTCTTG TCCGTGTTGT ACATCGAACA CCTGAACGAG
GCCGTGGACT TTTATTTTCC ATTCAAGGGC AGGGCGAAAA TTTCCCCGGG CTCCGAGAAT
GGTTGGTAA
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| Protein sequence | MDDEFVANQN AGNPFGDDQD SDAAFWERVS EDFSVSDYFR LNPINLQSPA ALAARDVAQE
CQSKWGIEID PDDTLITTLY IEDPKLYPAP HRANVAHSMT LTEALLRNWQ QKGNGDWFDH
LGHLQPHHEG GLDCQVVDEK LPPYDCVAYE AVYRKSDPQH YDSTTQLRLT AEAFKQYIWD
HNLQAGYLAY LKQFWQAHAD DYNLMLKAGL FRAAWLQAEE NTLKAEHKDM VLEALGLPAD
QGWKQLSFDA FVAAPISTRV TISELQVHGY SAVDIMVIRS ADSPTVLLYI PGNSSPIHTF
ANADALKEWV ALMCKDPGKR RSFEAHFSAT DDVDGFFYSG VATALKGFAV YPKLLDAATG
AWNPRKLVQF GEPLQPWPFS HFKDRIKAKS ETDALQKIRN HDDYWKEEVS GGLSECVSVL
GGVAIVFPEL IPVIAGLSLA LVGLGVDAAV NGRTLDERQA GLGRIAFGVL NALPILAEEG
AAVEAGAEIG LIDEAGDGYE VSGTTAPIDP AVEVEPIPVF REEPPALRSL DAKMRRLLRA
LEVTQDLPGL ASGEVAGVYP LEGKSYIELH DRAFRVEWVP QERQYRIRSA SDPRVWGPYV
KTIDTGYWDL DLKLGLRGGE SFDGSQLPPA SEAESAMLPV VPDEPAVEIQ RWGPKVQVEL
PLDQIMIEEV QSQAKGTVVE KYFIQIGGIR KNVYYDADIP CWRTDPSSNG LVWLDRNGVW
NSGSENAFRK EEAKLPQSRR FEIYSFPRVP RLPADAEPIS RVIHHIWLGE RMPGDNLLEK
MLDNMRTSPD LRFELHIDIN HPTAHQQLLD YFSAHPQMQI SMLKEEAFFP KFLSGENGEA
FNYFMHSDNR NYAAASDILR YRLINEYGGI YLDCDDTLDV PFAGIPLKAG PNDVLLGRRL
DAQQLSYTGP GNSHFASHPD NPVLKRILKE INTRFQNEKQ TNKAFFSTRR PFIDHSSEAL
RSASRDRMTP YMTRISDLTG PKLMSDVLRK LRPDYFDLLE RSYLPVDEVL SVLYIEHLNE
AVDFYFPFKG RAKISPGSEN GW
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