| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4997 |
|---|
| Symbol | |
|---|
| ID | 1186682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 5676226 |
|---|
| End bp | 5677671 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637396318 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_794730 |
|---|
| Protein GI | 28872111 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTGT CTGAACTCAA GAACGCGGGA CGCACCCCCG AGTTGCCGAT GAGCCTGACG
CTGGCCGATG CGGCCGGCCC GGCCAAGTTG CAATTGCTGA GCTTGCTGCG CGTGTTGCCG
GGGCAGCGTT ATGTGGGGGC CGGTGTGTGG CGAGGCAGAA CCGTGCTGGC AAAACTGCTG
GTTGGCGACA AGGCCGCCCG GCACTTTCAG CGTGAACTGG CCGGGGTGCG TCTGCTTGCC
GAGCAAGGCT TGACCACACC GCTGTTGCTG GCCGACGGCT TGCAGGAAGG CGAAGGTGGC
TGGCTGTTGT TCGAGTTTCT GGAGCAGGCG TCAAGTTTGG GCGATGCCTG GACTGAGGTT
GAGGAACTGC CGCCTCTGGC CGACGAGCAG CAAGCGGTGC TCGGCGAGGC GCTGACCGCC
ATCGCTCAGC AGCACGCCAA AGGCTTGTGG CAGGAAGATC TGCACCTGGA CAATCTGCTG
CGTCATAAGG GGCAGCTGTA CCTGATTGAT GGGGCGGGTA TTCGCGCCGA GCAGGCCGGC
AAGCCGTTGT CGCGGCAAAA GGTGCTGGAA AACCTCGGGG TATTCTTTGC TCAGTTGCCC
AAGGCTTTCG AGCCGTTCAC GGAAGAGCTG CTGGTGCATT ATCTGCTGAG CAACGGCGAA
CATGGTTTGC CGATGGAGGC GCTGCAACGG CAGATCGACA AGGTTCGCAG CTGGCGGCTC
AAGGATTTTC TCGGCAAGAC CGTGCGCGAT TGCAGCCTGT TCAGCGTCGA GGACACCGCA
TCGGTGTTTC GCGCCATTCG CCGCAACGAA GAAGCGGCTA TGCTGCCGGT GCTTGAGCAG
GCTGACGCCT TGCTCGGCAA AGGGCACTTG TACAAGACCG GTGGCGCGGC GAGCGTGGGG
CGGGTCGAGG CCAGCGGTCG CACGCTGGTC ATCAAACGTT ACAACATCAA GAATTTCAGC
CACTGGCTCA AGCGCTTCTG GCGCCCGAGT CGCGCCTGGC ATTCGTGGCG CGAAGGCAAT
CGCCTGATGT TTCTCGGCAT CGCCACGCCC AAACCGCTGG CGGTTCAGGA GCGGCGCTTC
CTTGGTTTGC GCAGCAAAGC CTGGCTGGTC ACCGAGTTTA TCGACGGGCC GGACATCATC
GAGCGCTTCG CGCCCTATGT CGAAAGCGGT GATGCACCTG AGGCCGAGTT GCTGGCCCTG
GACACGCTGT TCGCACAACT TATCCAGGCG CGCATCAGCC ATGGCGACTT CAAAGGGCAC
AACCTGTTCT GGCACAAGGA CCGCTGGGCG ATGATCGACC TGGATGCCAT GCAACAGCAC
AGTTCGCAAT CGTCCTTTGC AGCAGCCTAC GCGCGTGACC GGGCGCGCTT CATGCGTAAC
TGGCCAGTGC ACAGCGCGCT GCACCAGAAG CTGGAGCAGC GCTTGCCGAA GATCGAGCCG
GCCTGA
|
|---|
| Protein sequence | MRLSELKNAG RTPELPMSLT LADAAGPAKL QLLSLLRVLP GQRYVGAGVW RGRTVLAKLL
VGDKAARHFQ RELAGVRLLA EQGLTTPLLL ADGLQEGEGG WLLFEFLEQA SSLGDAWTEV
EELPPLADEQ QAVLGEALTA IAQQHAKGLW QEDLHLDNLL RHKGQLYLID GAGIRAEQAG
KPLSRQKVLE NLGVFFAQLP KAFEPFTEEL LVHYLLSNGE HGLPMEALQR QIDKVRSWRL
KDFLGKTVRD CSLFSVEDTA SVFRAIRRNE EAAMLPVLEQ ADALLGKGHL YKTGGAASVG
RVEASGRTLV IKRYNIKNFS HWLKRFWRPS RAWHSWREGN RLMFLGIATP KPLAVQERRF
LGLRSKAWLV TEFIDGPDII ERFAPYVESG DAPEAELLAL DTLFAQLIQA RISHGDFKGH
NLFWHKDRWA MIDLDAMQQH SSQSSFAAAY ARDRARFMRN WPVHSALHQK LEQRLPKIEP
A
|
|---|
| |