Gene PSPTO_4974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4974 
Symbol 
ID1186659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5644453 
End bp5645199 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content60% 
IMG OID637396295 
Productlipoprotein, putative 
Protein accessionNP_794707 
Protein GI28872088 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTAT TGAGGATCAC TTCACTGGCT TGCCTGGCCC TGTTGCTCGG CGCCTGCCAA 
AGCCTCTTCA CGCCCAACAT GCGCACACCG CTGCAAGTCC AGCGCGATGC GTCCGAGCTG 
ATCAAGCCGG GCTGCACCAC GGCGGATTGC CCGCTGGTGA ACATCGACAC GGTGCACTTT 
GCCGATGAGC CGCGACTGGA CGCTATCGTT CAGAAGACGC TGCTGCAATT GACTGTTGCC 
GACACCAGCG CATCGCCGCC TGCGTCCATC AAAGCCTATC AGGAGCAGTT TCTGAGCCAG 
GCCCAGGGGC GCAACAGCAG TTATCTGCAG GCCAAGGTAC GCGAACAGCA TGACGGTATC 
GTGGTTGTCG AACTCTCCAG CTACCTGGAT AACGGTGGCG CTCACGGCAA CCCTGGCCGG 
GCGTTCATCA ACTATTCGCG CCCGCAACAG AAGGTTCTGA CCCTGGCAGA CATGATCGTG 
CCGGGCAAGG AAAGCGAGTT CTGGCAAAAG GCGCAACTGG CCCACCAGAG CTGGCTGGTG 
TCAGGCAAGC TGAATGAAGA CAGCGAGTTC ATGAAGACCT GGCCGTTCAA GCGTACGCCA 
CACATTGCGC TGACCTACGG CGCGGTCATC CTCAAGTATT CGGTGGACAC CATCGCGCCG 
TACTCGATGG GCCATATCGA GCTGAAGGTT CCTTATCCTC AGCTCAATGG CATCCTCAAG 
CCGGAACTGT TCCCCGGCCG CGGCTGA
 
Protein sequence
MSLLRITSLA CLALLLGACQ SLFTPNMRTP LQVQRDASEL IKPGCTTADC PLVNIDTVHF 
ADEPRLDAIV QKTLLQLTVA DTSASPPASI KAYQEQFLSQ AQGRNSSYLQ AKVREQHDGI 
VVVELSSYLD NGGAHGNPGR AFINYSRPQQ KVLTLADMIV PGKESEFWQK AQLAHQSWLV 
SGKLNEDSEF MKTWPFKRTP HIALTYGAVI LKYSVDTIAP YSMGHIELKV PYPQLNGILK 
PELFPGRG