| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4959 |
|---|
| Symbol | |
|---|
| ID | 1186644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 5622904 |
|---|
| End bp | 5623599 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637396280 |
|---|
| Product | lipoprotein, putative |
|---|
| Protein accession | NP_794692 |
|---|
| Protein GI | 28872073 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3009] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTC TACGCCTTCC CCTGATCTTG CTGATGACTG GCGTTCTGGG TCTGGCTGGT
TGCAGTTCGC GCCAGCCGAC CGCGCTGTAT CAGCTCGATA GCGGTGAGCC TGGTCAGCCG
AAACAGAGTA GCGGTCTGGC AGTATTGCTG GGTCCTGTTT CGGTGGCCGA CTATCTGCAA
CGCGAAACCC TTTTACAACG CCAGCCGGAT GGCACCCTGA CCGCATCGCC TGACGGGCGC
TGGGCGGGCA ACCTGTCTTC GGATATCGAC CAGTTGCTCC TGCGCCAACT GGCCTGGAAA
CTGGACAGCC AGCGAGTCGT AATGGCGCCT GCGGTTGCCA ATTTCACGCC GGACGTTCAG
GTCGTATTGT CGATCACCCG TCTGGACTCC GGTGCCAAAC AGCCTGCGGT TCTGGATGCG
CAATGGCGTC TTCTGGACCG CAAAGGCCAT GTCCGCGACA GCCGACTGGT CCACCTTGAG
CAAGTCCATG CCGGCAGCTC TGCCGACCAG GTCAAGGCGC AAGGCATGCT CTTGCAGCGC
CTGGCCGATC AGGTCAGCAC GGCGATCAAG CCGATTTCCT GGCAGCCGCT CGAAGAGCCA
AAAAAGGCCC CGGTGGCCAA GGCCAAAGAG CCTGACAAGC CACGCATGCC AATGGCATCG
CCGATACGTA CCGACCTTGA GGTGTTCCGC TTCTAG
|
|---|
| Protein sequence | MNFLRLPLIL LMTGVLGLAG CSSRQPTALY QLDSGEPGQP KQSSGLAVLL GPVSVADYLQ
RETLLQRQPD GTLTASPDGR WAGNLSSDID QLLLRQLAWK LDSQRVVMAP AVANFTPDVQ
VVLSITRLDS GAKQPAVLDA QWRLLDRKGH VRDSRLVHLE QVHAGSSADQ VKAQGMLLQR
LADQVSTAIK PISWQPLEEP KKAPVAKAKE PDKPRMPMAS PIRTDLEVFR F
|
|---|
| |