| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4850 |
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| Symbol | |
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| ID | 1186533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5494865 |
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| End bp | 5495938 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396170 |
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| Product | hypothetical protein |
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| Protein accession | NP_794584 |
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| Protein GI | 28871965 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGTGCCA TCAGCTACCG TCAGATAATG GACGGAAATG TCGTCCGCCG TTACGGTGTT
GCGAAGTTGC CGCACCGGTT TGAGTTGTCC TGCGATGACA AAGGGAAAGT TGCCATGAGC
AGTCGCATTA CCTTGGTGCT CGCGGTCCTG TTTCTGCTGG GCGCGTTGAT TGCCGGATAT
CTGGGAATCG CCGTCAGCAA ACCGGCTGAG GTACCGGCAG TTGTCAATAC GTCAGCACCG
CCTGTCGCCA TCGAACAACC CGCTCAAACA CCCGTGACCC CGCCCGTCGA AGAAGCATTG
CGCCACAACG TTGTGGTTCT GGCCCGGGAC ATCCCGGCGT ACACCCCCAT CACGGCCGAA
GACCTGGCCA TTGAACGGCT CAAGATTGCA CCCCCCGGAA GTTTCGAGCG CATCGACAGC
CTTGTCGGCC GCAGCAGCTG GCGGACGCTG ACCGCCGGAA CCTGGCCCAG CGAGAGCAGC
TTTGACGCCG GAGGAACGCT GGCACGGATG ATCCGCCCAT ATGAACGGGC GCTGGCGTTG
CAGGTGGATG AAGTAACTGG CGCATCCGGG CAACTCAGCC CCGGCGACTA CGTGGACGTG
CTGCTTTACC TGCCTGAAGA CGCGAGCAAC CCCAGCCGCT CCAGCCAGGT GGTGGTGCCC
GCCCTGCGAA TTCTCGGGGT TGGAGGGCTG CTCGGCCCTG ATCGCGATGG CAAACCTGTG
CAGAACATCA GCGCCGACGA ACGCTTCAAA CAGGAACAAC AGCGGATCAA CGCCCGAACC
GTGACAGTCG CGGTGCCGGA AGCATTGCTG GCGCGGCTGA TGCTGGCGTC GCAAACCGGC
ATATTGCGCC TGGCAGTGCG CAGCGCCGAA GAAAGCAACC TGCAGGATTA CTGGGCAAGC
GAAACCGGCA GCCGCGATGC CGCCGAGCGG CTGGATTCAG CCAATCGCCA ACTGGTCAGC
TTTCGGCAAC TGAGCCTGAG CCCGACCAGT GCGGCAACGC CGGGCACCGC AACGCGCGCA
CAGCGCGCTG TCGAGGTGAT ACGCGGTAAC CAGATCACGC AACAAACTCC CTGA
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| Protein sequence | MGAISYRQIM DGNVVRRYGV AKLPHRFELS CDDKGKVAMS SRITLVLAVL FLLGALIAGY
LGIAVSKPAE VPAVVNTSAP PVAIEQPAQT PVTPPVEEAL RHNVVVLARD IPAYTPITAE
DLAIERLKIA PPGSFERIDS LVGRSSWRTL TAGTWPSESS FDAGGTLARM IRPYERALAL
QVDEVTGASG QLSPGDYVDV LLYLPEDASN PSRSSQVVVP ALRILGVGGL LGPDRDGKPV
QNISADERFK QEQQRINART VTVAVPEALL ARLMLASQTG ILRLAVRSAE ESNLQDYWAS
ETGSRDAAER LDSANRQLVS FRQLSLSPTS AATPGTATRA QRAVEVIRGN QITQQTP
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